Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_O18
(1202 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 38 0.011
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 33 0.53
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 33 0.53
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 33 0.53
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.93
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 3.7
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 5.0
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 8.7
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.011
Identities = 32/128 (25%), Positives = 40/128 (31%), Gaps = 2/128 (1%)
Frame = -3
Query: 885 GGXAGXSGPXGXGNXXXXXXERXDXVRXAAXGGGEXXGGXDPRXRPGAWVXWDGXRXCTA 706
GG G G G G R A G G GG + + W G + +
Sbjct: 54 GGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQG-GS 112
Query: 705 XGWRXXGXXGGXRRDXXXXERXLGXXXXGXARXQGXGXAQ--VTWGXXXXGFXGWXXWXG 532
G G G R D + G G + G G +Q G G G W G
Sbjct: 113 QGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGG 172
Query: 531 XXXGGXRG 508
GG +G
Sbjct: 173 SQDGGSQG 180
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.30
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +3
Query: 408 PPXLPPXRXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRP--PXXRXXXPXPXTLPXPXPR 581
PP PP + R S P P P S P P P P P T P P PR
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP-PRTPPSPEPR 181
Query: 582 SPXPXP 599
+P P
Sbjct: 182 NPPRTP 187
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 429 RXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSPXPXPXP 605
R R +RRP P P PP + P P P P P P P P
Sbjct: 78 RRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYP 136
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 429 RXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSPXPXPXP 605
R R +RRP P P PP + P P P P P P P P
Sbjct: 78 RRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYP 136
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 429 RXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSPXPXPXP 605
R R +RRP P P PP + P P P P P P P P
Sbjct: 78 RRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYP 136
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.93
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
Frame = -3
Query: 750 PGAWVXWDGXRXCTA---XGWRXXGXXGGXRRDXXXXERXLGXXXXGXARXQGXGXAQVT 580
PG W W G R GW G GG R G G G G +
Sbjct: 29 PGRWGGWGGNRWGGGGGPGGWGNNG-GGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGD 87
Query: 579 WGXXXXGFXGWXXWXGXXXGGXRGXRXAXGXGWG 478
WG G G G G G G WG
Sbjct: 88 WGGNGGGGRG-----GGGRGDWGGNNNGGGGNWG 116
Score = 29.1 bits (62), Expect = 6.6
Identities = 37/133 (27%), Positives = 39/133 (29%), Gaps = 1/133 (0%)
Frame = -3
Query: 873 GXSGPXGXGNXXXXXXERXDXVRXAAXGGGEXXGGXDPRXRPGAWVXWDGXRXCTAXGWR 694
G GP G GN R R GG GG + G W G G
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGG-RGGGDWGGNNGGGGNWGGNGGGRGDWGG----NGGG-- 94
Query: 693 XXGXXGGXRRDXXXXERXLGXXXXGXARXQGXGXAQVTWGXXXXGFXGWXXWXGXXXGGX 514
G GG R D G G G G WG G G G G
Sbjct: 95 --GRGGGGRGDWG------GNNNGGGGNWGGGGNNDGGWGGNNGG-GGGGRGGGGRGGDG 145
Query: 513 RGXRXAXGXG-WG 478
RG + G G WG
Sbjct: 146 RGPPGSNGGGDWG 158
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/88 (25%), Positives = 28/88 (31%)
Frame = +3
Query: 408 PPXLPPXRXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSP 587
PP PP + S P + + P + P P P + P P SP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 588 XPXPXPAXSXYLXAXIPTXAXIXXRPXG 671
P P P S + P A P G
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/88 (25%), Positives = 28/88 (31%)
Frame = +3
Query: 408 PPXLPPXRXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSP 587
PP PP + S P + + P + P P P + P P SP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 588 XPXPXPAXSXYLXAXIPTXAXIXXRPXG 671
P P P S + P A P G
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/88 (25%), Positives = 28/88 (31%)
Frame = +3
Query: 408 PPXLPPXRXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSP 587
PP PP + S P + + P + P P P + P P SP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 588 XPXPXPAXSXYLXAXIPTXAXIXXRPXG 671
P P P S + P A P G
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +3
Query: 492 PXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSPXPXPXPAXSXYLXAXIPTXA 647
P + P P + P P P P P+ P P P + Y +P A
Sbjct: 45 PQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA 96
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +3
Query: 546 PXPXTLPXPXPRSPXPXPXPAXSXYLXAXIPTXAXIXXRPXGHP 677
P P P P P+ P P P + Y +P A +P P
Sbjct: 93 PVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP 136
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 5.0
Identities = 22/119 (18%), Positives = 32/119 (26%), Gaps = 1/119 (0%)
Frame = +3
Query: 480 PNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPR-SPXPXPXPAXSXYLXAXIPTXAXIX 656
P P P +P P P P P P+ P P P P L + +
Sbjct: 211 PKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLK 270
Query: 657 XRPXGHPLXTRXXSXPXRCTXVXRPXQXXXXXXXXXXXXXSXPRXRXRXPSXDPLSPTH 833
+P +P + +P S P + + L P H
Sbjct: 271 PKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPKPELKPNH 329
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +3
Query: 408 PPXLPPXRXRXHSXSRRPXXAXXSPNQXPXXSXXPXXRP-PXXR-XXXPXPXTLPXPXPR 581
P P + + + PN P + P +P P + P P P P PR
Sbjct: 251 PEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPR 310
Query: 582 S-PXPXPXP 605
S P P P P
Sbjct: 311 SKPNPKPKP 319
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 480 PNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSPXPXPXP 605
PN P P P P P P P P+ P P P P
Sbjct: 161 PNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPK-PKPNPKP 201
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 480 PNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXPRSPXPXPXP 605
PN P P P P P P P P+ P P P P
Sbjct: 197 PNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPK-PKPNPNP 237
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 450 SRRPXXAXXSPNQXPXXSXXPXXRPPXXRXXXPXPXTLPXPXP-RSPXP 593
S P +P P + P PP + P P P P P SP P
Sbjct: 495 SSAPVHTPPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAP 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,992,660
Number of Sequences: 27780
Number of extensions: 135968
Number of successful extensions: 735
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3307723186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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