Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O15
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634...    30   2.7  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.6  
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620...    29   4.7  

>03_02_0197 +
           6337212-6337278,6339261-6340517,6340599-6340626,
           6340735-6340897
          Length = 504

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +2

Query: 311 MKAYENFMMMYKVGFLPKNLEFSIFYE-KMREEAIALFKLFYYAKDFECFYKTACYARVY 487
           +  Y  +  M   G +P  L++++F      +EA+    L +Y   F+     A +A  Y
Sbjct: 197 LNVYPYYDYMRSNGVIP--LDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDAAYFAMAY 254

Query: 488 MNQXNVLIRLLHSYYP 535
           +N  NV + +  + +P
Sbjct: 255 LNVTNVPVMVTETGWP 270


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 289  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 387
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>01_07_0248 +
           42261373-42261609,42261733-42261905,42261986-42262058,
           42262148-42262282,42262352-42262562,42262886-42263034,
           42263169-42263267,42263821-42263989,42264176-42264308,
           42264600-42264694,42264774-42264882,42265136-42265295,
           42265433-42265594,42265814-42265985,42266254-42266402,
           42266914-42266951,42267779-42267839,42267913-42268155,
           42268233-42268315,42269521-42269609,42270449-42270495,
           42270576-42270656,42270737-42270899,42271077-42271267,
           42271691-42271762
          Length = 1097

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 229 NVVEKRQNLLLLFDERSVN----RCRFEFRYGATESEGNKPQLKSRQSSWSEHVEANM 68
           N V K+  ++L  ++R V+    +   EF Y AT  + +KP +       SEHV+ N+
Sbjct: 263 NYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLPSEHVDVNI 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,885,278
Number of Sequences: 37544
Number of extensions: 330110
Number of successful extensions: 759
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)