Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O10
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1370 - 32990002-32990244,32990950-32991943,32992019-329922...    38   0.012
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783...    32   0.57 

>04_04_1370 -
           32990002-32990244,32990950-32991943,32992019-32992240,
           32993413-32993543
          Length = 529

 Score = 37.9 bits (84), Expect = 0.012
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +3

Query: 708 GKHVTDVTNASRTMXXNIENLXLGSXAIXVYEVPXSVXPDIKSXS 842
           G HVTD +NASRTM  N++ L      +    +P  + P I S S
Sbjct: 196 GHHVTDCSNASRTMLMNLKALDWDKPTLETLGIPAEILPKIISNS 240


>04_04_1197 +
           31672019-31672325,31672431-31672740,31673334-31678335,
           31678677-31678715
          Length = 1885

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 287 GKDLKYQXILVXAILCCTXSPXXXSRRXHLXIXKRXXVTGTEAQGN 424
           GKD K +       LCCT      + R HL + KR  VT T+   N
Sbjct: 158 GKDSKARCKYCHKDLCCTSKNGTSALRNHLNVCKRKRVTSTDQPVN 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,460,410
Number of Sequences: 37544
Number of extensions: 127539
Number of successful extensions: 121
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)