Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O07
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          31   3.3  
BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        30   7.6  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     30   7.6  

>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 16/53 (30%), Positives = 16/53 (30%)
 Frame = +2

Query: 494 GPXXXXXXXXXXPPPPXXXXXXXXXXFFFPXXXXXGXPXXPXPPXXXXXPPPP 652
           GP          PPPP          F F        P  P PP     PPPP
Sbjct: 37  GPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPP 89


>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = +1

Query: 526 PPPPPPXXXXXXXXXXFFPXXXXXGXPXXPXXPXKXXXSPPP 651
           PPPPPP            P       P  P  P     SPPP
Sbjct: 109 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 150


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = +1

Query: 526 PPPPPPXXXXXXXXXXFFPXXXXXGXPXXPXXPXKXXXSPPP 651
           PPPPPP            P       P  P  P     SPPP
Sbjct: 654 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 695


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,834,377
Number of Sequences: 237096
Number of extensions: 1710254
Number of successful extensions: 7939
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7151
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)