Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O07
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    31   1.1  

>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +1

Query: 526 PPPPPPXXXXXXXXXXFFPXXXXXGXPXXPXXPXKXXXSPPP 651
           PPPPPP          F P       P  P  P     +PPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPP 810



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +2

Query: 530 PPPPXXXXXXXXXXFFFPXXXXXGXPXXPXPPXXXXXPPPP 652
           PPPP          F  P       P  P PP     PPPP
Sbjct: 771 PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPP 811


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +1

Query: 526 PPPPPPXXXXXXXXXXFFPXXXXXGXPXXPXXPXKXXXSPPP 651
           PPPPPP          F P       P  P  P     +PPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPP 810



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +2

Query: 530 PPPPXXXXXXXXXXFFFPXXXXXGXPXXPXPPXXXXXPPPP 652
           PPPP          F  P       P  P PP     PPPP
Sbjct: 771 PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPP 811


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,919,782
Number of Sequences: 27780
Number of extensions: 227130
Number of successful extensions: 1177
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)