Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O05
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379...    98   1e-20
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924...    96   3e-20

>04_04_0211 -
           23636377-23636532,23636624-23636805,23637853-23637959,
           23637997-23638280
          Length = 242

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 67/146 (45%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
 Frame = +2

Query: 470 GRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFND 649
           GR  GKRVV +  L SGLLLVTGPF  N  P+RR+ Q YVI TST++ +    + K F+D
Sbjct: 109 GRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDD 167

Query: 650 DYFKXNKXCVKRTVKRKEGDDIFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGSPXRQE 823
            YF  +K   K+  K+ EG ++F T+KE  K +P E +K DQK VD  +IKAI      E
Sbjct: 168 KYFSRDK---KQKAKKTEG-ELFETEKEATKNLP-EFKKEDQKVVDAELIKAI------E 216

Query: 824 GXP-RXTSXGA-FGLRSSQYPHRXGF 895
             P   T  GA F LR    PH   F
Sbjct: 217 AVPDLKTYLGARFSLRDGDKPHEMVF 242


>02_04_0433 -
           22891261-22891509,22892181-22892301,22892405-22892496,
           22892692-22892755,22892855-22892920,22893102-22893193,
           22893991-22894050,22894181-22894270,22894484-22894613,
           22895066-22895157,22895299-22895373,22895663-22895754,
           22896496-22896586,22897541-22897574,22897745-22897791,
           22899110-22899209,22899300-22899436,22900837-22901015,
           22901146-22901188,22901264-22901297,22901839-22901948,
           22902043-22902224,22903062-22903168,22903266-22903480
          Length = 833

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
 Frame = +2

Query: 320 EPEQYPSNVGSPSTPLRRKSVPHLVAVHSASMYAGSDPT*R*ELFAFSSXGRHAGKRVVL 499
           EP+ YP++   P  P  RK+ P  +    +++  G+              GR+ GKRVV 
Sbjct: 47  EPKFYPADDVKPRAPSTRKANPTKLR---STITPGT--------VLILLAGRYMGKRVVF 95

Query: 500 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFKXNKXCV 679
           +  L SGLLL+TGPF  N  P+RR+ Q YVI TST++ +   K+ K F+D YF  +K   
Sbjct: 96  LKQLKSGLLLITGPFKINGVPIRRVNQAYVIATSTKVDISGVKVDK-FDDKYFARDK--- 151

Query: 680 KRTVKRKEGDDIFATKKE--KYVPSEQRKTDQKTVDEAVIKAI 802
           K   K+ EG ++F T+KE  K +P + +K DQK VD  +IKAI
Sbjct: 152 KAKAKKTEG-ELFETEKEATKNLP-DFKKDDQKAVDAELIKAI 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,588,418
Number of Sequences: 37544
Number of extensions: 460619
Number of successful extensions: 1076
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)