Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O02
         (878 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    50   1e-04
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    40   0.063

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 24/41 (58%), Positives = 25/41 (60%)
 Frame = +3

Query: 195 AAPXPXWXLFXXXXXXGXXXRXGXVKAGPAXXVLGSAKAIG 317
           AAP P W +F      G   R G VKAGPA  VLGSAKAIG
Sbjct: 22  AAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKAIG 62


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 40.3 bits (90), Expect = 0.063
 Identities = 19/40 (47%), Positives = 21/40 (52%)
 Frame = +3

Query: 195 AAPXPXWXLFXXXXXXGXXXRXGXVKAGPAXXVLGSAKAI 314
           AAP P W LF      G   R G +KAGPA  V+G A  I
Sbjct: 22  AAPEPKWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQI 61


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,439,916
Number of Sequences: 1657284
Number of extensions: 3018632
Number of successful extensions: 797
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)