SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N24
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80199-1|CAC27699.1|  703|Homo sapiens MLN51 protein.                  34   0.60 
BC050526-1|AAH50526.1|  703|Homo sapiens cancer susceptibility c...    34   0.60 
BC044656-1|AAH44656.1|  703|Homo sapiens cancer susceptibility c...    34   0.60 
CR542083-1|CAG46880.1|  377|Homo sapiens PEX14 protein.                33   1.0  
CR450321-1|CAG29317.1|  377|Homo sapiens PEX14 protein.                33   1.0  
BC006327-1|AAH06327.1|  377|Homo sapiens peroxisomal biogenesis ...    33   1.0  
AL591403-1|CAH70044.1|  377|Homo sapiens peroxisomal biogenesis ...    33   1.0  
AL354956-4|CAI19198.1|  377|Homo sapiens peroxisomal biogenesis ...    33   1.0  
AL139423-1|CAD20149.2|  377|Homo sapiens peroxisomal biogenesis ...    33   1.0  
AF045186-1|AAC39843.1|  377|Homo sapiens peroxisomal membrane an...    33   1.0  
AB017546-1|BAA36837.1|  377|Homo sapiens peroxisomal membrane an...    33   1.0  
BC051828-1|AAH51828.1|  812|Homo sapiens cyclic AMP-regulated ph...    31   4.2  
BC036399-1|AAH36399.1|  793|Homo sapiens ARPP-21 protein protein.      31   4.2  
BC013438-1|AAH13438.1|  137|Homo sapiens LOC375295 protein protein.    31   7.3  

>X80199-1|CAC27699.1|  703|Homo sapiens MLN51 protein.
          Length = 703

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 513 PRKPPLL-PFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLTHKTPLPIKQHP 680
           P +P  L P +L  + NH  +G+G  P F R E     G R  + + +   P+ + P
Sbjct: 478 PGQPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP 534


>BC050526-1|AAH50526.1|  703|Homo sapiens cancer susceptibility
           candidate 3 protein.
          Length = 703

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 513 PRKPPLL-PFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLTHKTPLPIKQHP 680
           P +P  L P +L  + NH  +G+G  P F R E     G R  + + +   P+ + P
Sbjct: 478 PGQPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP 534


>BC044656-1|AAH44656.1|  703|Homo sapiens cancer susceptibility
           candidate 3 protein.
          Length = 703

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 513 PRKPPLL-PFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLTHKTPLPIKQHP 680
           P +P  L P +L  + NH  +G+G  P F R E     G R  + + +   P+ + P
Sbjct: 478 PGQPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP 534


>CR542083-1|CAG46880.1|  377|Homo sapiens PEX14 protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>CR450321-1|CAG29317.1|  377|Homo sapiens PEX14 protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>BC006327-1|AAH06327.1|  377|Homo sapiens peroxisomal biogenesis
           factor 14 protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>AL591403-1|CAH70044.1|  377|Homo sapiens peroxisomal biogenesis
           factor 14 protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>AL354956-4|CAI19198.1|  377|Homo sapiens peroxisomal biogenesis
           factor 14 protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>AL139423-1|CAD20149.2|  377|Homo sapiens peroxisomal biogenesis
           factor 14 protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>AF045186-1|AAC39843.1|  377|Homo sapiens peroxisomal membrane
           anchor protein HsPex14p protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>AB017546-1|BAA36837.1|  377|Homo sapiens peroxisomal membrane
           anchor protein protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -3

Query: 553 NINKSNGKSGGFRG*QIQLTRRQWSSXEASPKARARAVPVAEFSPKSFLFVRPHSRLELF 374
           NIN+   +    +G  + L RRQ+    ++PK  +  +PV   SP S   V  HS  ++ 
Sbjct: 208 NINELKSEINSLKG--LLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDIS 265

Query: 373 ALASEWRTSKTKK 335
            +++E  +S   K
Sbjct: 266 PVSNESTSSSPGK 278


>BC051828-1|AAH51828.1|  812|Homo sapiens cyclic AMP-regulated
           phosphoprotein, 21 kD protein.
          Length = 812

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 561 DSLTSISRTAKAVASGADRFS*QGASGAVRRPHPRQERGPFR*RSSVLSPSC 406
           DS +S   T K   +G++  S  G+SG++ R HP  +  P     +  SP C
Sbjct: 394 DSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGC 445


>BC036399-1|AAH36399.1|  793|Homo sapiens ARPP-21 protein protein.
          Length = 793

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 561 DSLTSISRTAKAVASGADRFS*QGASGAVRRPHPRQERGPFR*RSSVLSPSC 406
           DS +S   T K   +G++  S  G+SG++ R HP  +  P     +  SP C
Sbjct: 340 DSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGC 391


>BC013438-1|AAH13438.1|  137|Homo sapiens LOC375295 protein protein.
          Length = 137

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 573 GSGASPSFRRQEPPAASGARGLQLTHKTPLPIKQHPP 683
           G G  P     + P  + ARG + TH+ P PI + PP
Sbjct: 65  GRGRVPGSGFSQAPIPAHARGPRPTHEAPTPIVEAPP 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,376,807
Number of Sequences: 237096
Number of extensions: 2524976
Number of successful extensions: 5721
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5720
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -