Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N18
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0032 + 7564153-7564719,7564844-7565128,7565207-7565524,756...    30   2.8  
07_01_0100 - 748571-748921,751082-752089                               29   3.7  
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467...    29   4.9  
08_01_0452 - 3999072-3999344                                           28   8.5  
06_03_0272 + 19053455-19053587,19054665-19056627,19056827-190568...    28   8.5  

>11_02_0032 +
           7564153-7564719,7564844-7565128,7565207-7565524,
           7565612-7565839,7566662-7566762,7566852-7566933,
           7567230-7567364,7567460-7567516,7568030-7568167
          Length = 636

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 306 LSAFEQRPLQSKV-VSFLRQSQCGFQGYVPRVC 401
           +  F ++PLQS V V FLR S   F G + ++C
Sbjct: 1   MKTFTRKPLQSAVHVQFLRSSGRAFHGLIDQLC 33


>07_01_0100 - 748571-748921,751082-752089
          Length = 452

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 436 LRHVQ-EQRGLRPMRSATSTPQCQKTRPRLLGINAGVDTQGDRIYGGSVH 582
           L HV    RG        STP+C   R   + +  G+DT G  IY  S+H
Sbjct: 180 LEHVDFNHRGRGDFGHTFSTPRCPLLRRLRIAMCTGIDTMG--IYSDSLH 227


>01_01_0623 +
           4672581-4673413,4674274-4674389,4674694-4674902,
           4675953-4676072,4676185-4676313,4676394-4676442,
           4676899-4676970,4677574-4677707,4677798-4677915,
           4678332-4678541,4678630-4678942,4679539-4679632,
           4679854-4679962,4680243-4680514,4680597-4680724,
           4680832-4681066,4681570-4681758,4681845-4682128,
           4682218-4682398,4682486-4682728,4682904-4682986,
           4683119-4683227,4687996-4688091,4688675-4688764,
           4688881-4689129,4689233-4689412,4690179-4690250,
           4691385-4691474,4691605-4691705,4691794-4691959
          Length = 1757

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +1

Query: 688 NGCSLFDRCXEXEVGN*LRXVWANTKLNLTGIVLTMCAXDPPXEIPXLAVY 840
           NG      C +   G   +     T  N+TG   ++C   PP E+P  A+Y
Sbjct: 781 NGTVTGKACPKGLYGTFCKECPLGTYKNVTGSSKSLCVQCPPDELPHRAIY 831


>08_01_0452 - 3999072-3999344
          Length = 90

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 491 PHSARR-LVPGSSESMREWTHKVTESMGGQFTELRR 595
           P S R  LVPGSS     W  K  E++G +    RR
Sbjct: 51  PTSGRSDLVPGSSAPRSRWPWKAEEAIGAELGRWRR 86


>06_03_0272 +
           19053455-19053587,19054665-19056627,19056827-19056887,
           19056975-19057198,19057573-19057642,19058453-19058515
          Length = 837

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 477 VGHVDPTVPEDSSPAPRNQCGSGHT 551
           +G + P +PE + P P+N CG G+T
Sbjct: 715 LGMIPPYIPEFNYPMPKN-CGGGNT 738


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,268,708
Number of Sequences: 37544
Number of extensions: 451764
Number of successful extensions: 1184
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)