Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N18
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    33   0.35 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    31   1.1  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    31   1.4  
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    30   2.5  

>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 458  AASDQCGRPRRPHSARRLVPGSSESMREWTHKVTESMGGQFTELRR 595
            A   +CG P+RP + R   PGSS S      KV E    ++ E ++
Sbjct: 1514 AYKKRCGTPKRPENPRERPPGSSPSENCRDVKVEELTADEYAEYKK 1559


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 647 YQCGGVLFNARYVLTAAHC 703
           ++CGG L +  +VLTAAHC
Sbjct: 82  HRCGGSLIDPNFVLTAAHC 100


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 653 CGGVLFNARYVLTAAHC 703
           CGG L   ++VLTAAHC
Sbjct: 62  CGGTLITLKHVLTAAHC 78


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +2

Query: 611 FAWDLTSRNTIT--YQCGGVLFNARYVLTAAHC 703
           F W    RN  T  + CG  + +  +++TAAHC
Sbjct: 38  FPWTAALRNKATKAHHCGASILDKTHLITAAHC 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,230,373
Number of Sequences: 27780
Number of extensions: 361430
Number of successful extensions: 873
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)