Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_N14
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 37 0.024
06_01_0486 - 3455030-3455770 34 0.13
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 34 0.17
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.29
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 1.6
03_01_0515 - 3864796-3865425 30 2.1
12_02_1174 - 26696869-26698191 29 3.6
11_01_0385 + 2915532-2916482 29 3.6
06_03_0905 + 25843547-25844314 29 3.6
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 29 3.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.6
06_02_0175 - 12624608-12625297 26 4.6
07_03_0890 - 22332768-22333382 29 6.3
07_03_0560 + 19479597-19480667 29 6.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.3
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 28 8.3
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 28 8.3
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 36.7 bits (81), Expect = 0.024
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Frame = +3
Query: 204 PXXPPPXFXXPQXPXFFSPXGPLXKXXXFF------LPP-PXFXPXXKXXXFFPPPP 353
P PPP F P P FSP P F LPP P F P PPPP
Sbjct: 268 PWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPP 324
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Frame = +1
Query: 172 PKGKPXXLXXPPXAPPRXFXXPNXPXFF-PPWXPXXKXXXFFYP----PPXXXXXXKXXX 336
P P L P APP F P+ P F PP P F +P PP
Sbjct: 257 PPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSF 316
Query: 337 F-SPPPP 354
+ SPPPP
Sbjct: 317 YPSPPPP 323
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 631 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXXXXXPXPPXPP 753
P PPPPPP P P PP PP
Sbjct: 287 PSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPP 327
>06_01_0486 - 3455030-3455770
Length = 246
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +1
Query: 169 CPKGKPXXLXXPPXAPPRXFXXPNXPXFFPPWXPXXKXXXF--FYPPPXXXXXXKXXXFS 342
CP P P PP P+ P + PP+ P + PPP S
Sbjct: 72 CPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPS 131
Query: 343 PPP 351
PPP
Sbjct: 132 PPP 134
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Frame = +1
Query: 148 PIFXXXNCPKGKPXXLXXPPXAPPRXFXXPNXPXF-FPPWXPXXK----XXXFFYPPPXX 312
P + P+G P PP PP P+ P F F P P + +Y PP
Sbjct: 36 PAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPP 95
Query: 313 XXXXKXXXFSPPPP 354
PPPP
Sbjct: 96 PPPYGVNSSQPPPP 109
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +2
Query: 203 PQXPPPXXXXPPXPXFFFPXGXPXKXXXFF--FTPPXFXXXXXXGXXFPPPP 352
P PPP PP P P G P + PP PPPP
Sbjct: 9 PHPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPP 60
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 1/70 (1%)
Frame = +1
Query: 547 GXXPPXXXXXGGXXPXPXXQXKXXXXXXPXPP-PPPPXXXXXXXXXXXXXXXXXXXPXXX 723
G PP G P P PP PPPP P
Sbjct: 29 GPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQM 88
Query: 724 XXXPXPPXPP 753
P PP PP
Sbjct: 89 YYQPPPPPPP 98
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 589 PXPXXQXKXXXXXXPXPPPPPPXXXXXXXXXXXXXXXXXXXPXXXXXXPXPPXPP 753
P P Q P PPPPPP P P PP PP
Sbjct: 572 PPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP 626
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 172 PKGKPXXLXXPPXAPPRXFXXPNXPXFFPPWXPXXKXXXFFYPPPXXXXXXKXXXFSPPP 351
P P PP PP N P F PP P PPP PPP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPP-------PPPPPLPQSNYASSQPPP 587
Query: 352 P 354
P
Sbjct: 588 P 588
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 192 SXXXPXXPPPXFXXPQXPXFFSPXGPLXKXXXFFLPPPXFXPXXKXXXFFPPPP 353
S P PPP P P PL PPP P PPPP
Sbjct: 601 SPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/66 (24%), Positives = 16/66 (24%)
Frame = +3
Query: 588 PXPPXPTXXXXXXXXXXPPPPPXXXXPXXXXXXXXXXXXXXPXXXXXXXXXXXPPXXXXP 767
P PP P PPPPP P P PP P
Sbjct: 587 PPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLP 646
Query: 768 XPXXPP 785
PP
Sbjct: 647 NRLVPP 652
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 202 PPXAPPRXFXXPNXPXFFPPWXPXXKXXXFFYPPPXXXXXXKXXXFSPPPP 354
PP APP PN P PP P PPP PPPP
Sbjct: 276 PPQAPPPP--PPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPPP 324
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 193 LXXPPXAPPRXFXXPNXPXFFPPWXPXXKXXXFFYPPPXXXXXXKXXXFSPPPP 354
L PP PP P P PP P PPP SPPPP
Sbjct: 69 LMPPPPPPPSVTSSPPPPPLPPPPPPPAASPP---PPPPSPPPPSPVKSSPPPP 119
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 631 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXXXXXPXPPXPP 753
P PPPPPP P P PP PP
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPP 161
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 203 PQXPPPXXXXPPXPXFFFPXGXPXKXXXFFFTPPXFXXXXXXGXXFPPPPXF 358
P PP PP P + P F F PP G +PP P F
Sbjct: 246 PPLPPFPSHPPPTPAWPHPGNQWPPLPPFPFHPPPMPAWPHPGNQWPPLPPF 297
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Frame = +3
Query: 144 GPHFPXXKLPKR*TXXSXXXPXXPPPXFXXPQXPXFFSPXGPLXKXXXFFLP-PPXFXP- 317
GP P + PK T S PPP P+ P P GP+ + P PP P
Sbjct: 55 GPKNPTPRPPKGPTYPSPVT--RPPPLVAPPKVPVTHPPKGPVTRPPPVTYPTPPVTTPP 112
Query: 318 -XXKXXXFFPPPP 353
+P PP
Sbjct: 113 VVVGPPVTYPTPP 125
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +1
Query: 172 PKGKPXXLXXPPXAPPRXFXXPNXPXFFPPWXPXXKXXXFFYPPP 306
P G P PP PPR + P+ P P P +P P
Sbjct: 391 PPGPPPLAQAPPRHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLP 435
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 548 GXXPPXXXXXXGXXPPPXXNXXXXXXXXXXPPPPPPXXXP 667
G PP PPP PPPPPP P
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAP 358
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 545 GGXXPPXXXXXXGXXPPPXXNXXXXXXXXXXPPPPPP 655
G PP PPP + PPPPPP
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355
>06_02_0175 - 12624608-12625297
Length = 229
Score = 25.8 bits (54), Expect(2) = 4.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 653 GGGGGGXGXXXXXXXCW 603
GGGGGG G CW
Sbjct: 114 GGGGGGGGGGGGGRRCW 130
Score = 25.4 bits (53), Expect(2) = 5.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 653 GGGGGGXGXXXXXXXCWXXGXGXXPPXXXXXGG 555
GGGGGG G W G G GG
Sbjct: 115 GGGGGGGGGGGGRRCWWGCGNGRRRHKGGKEGG 147
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 12/41 (29%), Positives = 12/41 (29%)
Frame = -1
Query: 752 GGXGGXGXXXXXXGXXXXXXXXXXXXXXXXXXXGGGGGGXG 630
GG GG G GGGGGG G
Sbjct: 67 GGGGGGGGSSGGSSWSYGWGWGWGTDSGGGGSSGGGGGGGG 107
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 12/41 (29%), Positives = 12/41 (29%)
Frame = -1
Query: 752 GGXGGXGXXXXXXGXXXXXXXXXXXXXXXXXXXGGGGGGXG 630
GG G G G GGGGGG G
Sbjct: 71 GGGGSSGGSSWSYGWGWGWGTDSGGGGSSGGGGGGGGGGGG 111
>07_03_0890 - 22332768-22333382
Length = 204
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 545 GGXXPPXXXXXXGXXPPPXXNXXXXXXXXXXPPPPPPXXXP 667
G PP PPP PPPPPP P
Sbjct: 73 GSPPPPPAEATPPPPPPPPPPERAVPEAADTPPPPPPPTAP 113
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 352 GGGGKXXXXXXXGXKXGGGKKKXXXFXRGPXGEKKXGXWGXXXXGGGXLG 203
GGGG G GGG K+ G G G G GGG G
Sbjct: 168 GGGGGGFGGDGGGGLGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFG 217
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = -1
Query: 353 GGGGEKXXXFXXXXKXGGG*KKXXXFXKGXXGGKKXGXLGXXKXRGGAXGGXXRXXGLPF 174
GGGG K F GGG G GG G G GGA GG G
Sbjct: 217 GGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGG--GGGGMGGGAGGGFGGGAGGGA 274
Query: 173 GQ 168
GQ
Sbjct: 275 GQ 276
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 5/66 (7%)
Frame = +1
Query: 172 PKGKPXXLXXPPXAPPRXFXXPNXPXFFPP-----WXPXXKXXXFFYPPPXXXXXXKXXX 336
P KP PP PP+ P P PP P PPP K
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 337 FSPPPP 354
PPPP
Sbjct: 377 PPPPPP 382
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 557 PPXXXXXXGXXPPPXXNXXXXXXXXXXPPPPPPXXXP 667
PP PPP PPPPPP P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGP 353
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 557 PPXXXXXXGXXPPPXXNXXXXXXXXXXPPPPPPXXXP 667
PP PPP PPPPPP P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 556 PPXXXXXGGXXPXPXXQXKXXXXXXPXPPPPPP 654
PP G P + + P PPPPPP
Sbjct: 15 PPQLEASGSDPDDPLLRDRVVVIAPPPPPPPPP 47
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 545 GGXXPPXXXXXXGXXPPPXXNXXXXXXXXXXPPPPPP 655
G PP G P P + PPPPPP
Sbjct: 70 GNFYPPPPPSMPGPLPAPYDHHHRGGGPAQPPPPPPP 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,861,741
Number of Sequences: 37544
Number of extensions: 479665
Number of successful extensions: 9964
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6245
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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