Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_N13
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 238 4e-63
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 238 4e-63
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 238 4e-63
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 238 4e-63
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 238 4e-63
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 238 4e-63
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 238 4e-63
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 238 4e-63
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 235 4e-62
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 222 3e-58
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 173 1e-43
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 150 1e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 150 1e-36
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 150 1e-36
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 144 5e-35
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 143 1e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 88 9e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 0.002
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 5.6
Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical p... 28 7.4
Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical p... 28 7.4
Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical p... 28 7.4
Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 9.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 9.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 9.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 9.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 9.8
AF003134-5|AAB54139.1| 357|Caenorhabditis elegans Nek (never in... 28 9.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (276), Expect = 5e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (276), Expect = 5e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 113/148 (76%), Positives = 118/148 (79%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR 471
SK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + +
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 472 *PRSCLRPSTPPXMYVAIQAVLSLYASG 555
+ P MYVAIQAVLSLYASG
Sbjct: 121 -TQIMFETFNTPAMYVAIQAVLSLYASG 147
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 175
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 822 SLXKS 836
SL KS
Sbjct: 236 SLEKS 240
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 235 bits (574), Expect = 4e-62
Identities = 110/136 (80%), Positives = 115/136 (84%)
Frame = +1
Query: 148 NGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQSKXGILTLKYPI 327
NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQSK GILTLKYPI
Sbjct: 12 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 71
Query: 328 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPP 507
EHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK + + + P
Sbjct: 72 EHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKM-TQIMFETFNTP 130
Query: 508 XMYVAIQAVLSLYASG 555
MYV IQAVLSLYASG
Sbjct: 131 AMYVNIQAVLSLYASG 146
Score = 110 bits (265), Expect = 1e-24
Identities = 68/125 (54%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V T + V+ T P + P
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIV-LDTGDGVTHT-VPIYEGYALPHA 174
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDY+MKILTERGY+FTTTAER IVRDIKEKL YVA F E+ A+ +
Sbjct: 175 IQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSS 234
Query: 822 SLXKS 836
SL KS
Sbjct: 235 SLEKS 239
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 222 bits (542), Expect = 3e-58
Identities = 105/130 (80%), Positives = 110/130 (84%)
Frame = +1
Query: 166 KAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQSKXGILTLKYPIEHGIIT 345
+AGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQSK GILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 346 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPPXMYVAI 525
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK + + + P MYVAI
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAI 123
Query: 526 QAVLSLYASG 555
QAVLSLYASG
Sbjct: 124 QAVLSLYASG 133
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 161
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 162 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 221
Query: 822 SLXKS 836
SL KS
Sbjct: 222 SLEKS 226
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 173 bits (421), Expect = 1e-43
Identities = 82/104 (78%), Positives = 86/104 (82%)
Frame = +1
Query: 244 MVGMGQXDSYVGXEAQSKXGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 423
MVGMGQ DSYVG EAQSK GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 424 LLTEAPLNPKGQQGRR*PRSCLRPSTPPXMYVAIQAVLSLYASG 555
LLTEAPLNPK + + + P MYVAIQAVLSLYASG
Sbjct: 61 LLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASG 103
Score = 115 bits (277), Expect = 4e-26
Identities = 72/125 (57%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
EKMTQIMFETFN+P +V +L R V + + V+ T P + P
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV-LDSGDGVTHT-VPIYEGYALPHA 131
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQEMXTXAAXT 821
LDLAGRDLTDYLMKILTERGYSFTTTAER IVRDIKEKL YVA F QEM T A+ +
Sbjct: 132 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 191
Query: 822 SLXKS 836
SL KS
Sbjct: 192 SLEKS 196
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 150 bits (364), Expect = 1e-36
Identities = 69/86 (80%), Positives = 71/86 (82%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKI 369
SK GILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 150 bits (364), Expect = 1e-36
Identities = 69/86 (80%), Positives = 71/86 (82%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKI 369
SK GILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 150 bits (364), Expect = 1e-36
Identities = 69/86 (80%), Positives = 71/86 (82%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDMEKI 369
SK GILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 144 bits (350), Expect = 5e-35
Identities = 66/83 (79%), Positives = 68/83 (81%)
Frame = +1
Query: 112 LCXXXXXXXXXXNGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQ 291
+C NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQ DSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 292 SKXGILTLKYPIEHGIITNWDDM 360
SK GILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 143 bits (347), Expect = 1e-34
Identities = 66/137 (48%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
Frame = +1
Query: 148 NGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQSKXGILTLKYPI 327
NGSG+ KAGFAG P+ F + VGRP++ VM G D ++G +A+S G+ +++YP+
Sbjct: 15 NGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPM 74
Query: 328 EHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTP 504
EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP + R
Sbjct: 75 EHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERS-AEIFFETFNV 133
Query: 505 PXMYVAIQAVLSLYASG 555
P +Y+ +QAVLSLYA+G
Sbjct: 134 PALYIQMQAVLSLYATG 150
Score = 51.2 bits (117), Expect = 9e-07
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 465 EKMTQIMFETFNSPX-HVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 641
E+ +I FETFN P +++ +L R V S + P K
Sbjct: 121 ERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPI--VKGFAMKHA 178
Query: 642 SSGLDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVA 779
+DLAGRD+T+YL +L GY F + E IVR++KE Y+A
Sbjct: 179 IQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLA 224
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 566 GIVLDSGDGVSHTVPIYEGYALPHAILRSGLGWSRLDRLPHEDPHREGLLVH 721
G+VLDSGDGV+H VPI +G+A+ HAI R L + REG H
Sbjct: 154 GVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFH 205
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 103 bits (247), Expect = 2e-22
Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Frame = +1
Query: 148 NGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVM-VGMGQX-DSYVGXEAQSKXGILTLKY 321
NG+G K G+AG P +FPS+VGRP + VG + D VG E +L + Y
Sbjct: 13 NGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINY 72
Query: 322 PIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPS 498
P+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP + + +
Sbjct: 73 PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKM-FQVMFEQY 131
Query: 499 TPPXMYVAIQAVLSLYASG 555
+YVA+QAVL+LYA G
Sbjct: 132 GFNSIYVAVQAVLTLYAQG 150
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +3
Query: 651 LDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQE 797
LD+AGRD+T YL+K+L +RGY+F +A+ VR +KEKL Y+A QE
Sbjct: 182 LDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQE 230
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 566 GIVLDSGDGVSHTVPIYEGYALPHAILR 649
G+V+DSGDGV+H P+YEG+AL H R
Sbjct: 154 GVVVDSGDGVTHICPVYEGFALHHLTRR 181
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 87.8 bits (208), Expect = 9e-18
Identities = 55/149 (36%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Frame = +1
Query: 148 NGSGMCKAGFAGXXAPRAVFPSI------VGRPRHQG------VMVGMGQXDSYVGXEAQ 291
NG+G K G+AG P+ + PS V Q V G+ D ++G EA
Sbjct: 13 NGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEAL 72
Query: 292 SKXGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKGQQG 465
S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN P+ ++
Sbjct: 73 SPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREY 132
Query: 466 RR*PRSCLRPSTPPXMYVAIQAVLSLYAS 552
P +Y+A+QAVL+L AS
Sbjct: 133 T--AEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 37.5 bits (83), Expect = 0.012
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 566 GIVLDSGDGVSHTVPIYEGYALPHAI 643
G+V+DSGDGV+H +P+ +GY + I
Sbjct: 172 GLVIDSGDGVTHCIPVADGYVIGSCI 197
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 651 LDLAGRDLTDYLMKILTERGYSFTTTAERXIVRDIKEKLXYVAXXFXQE 797
+ +AGRD+T ++ +L +R ++ + + IKEK YV +E
Sbjct: 200 IPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 325 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTP 504
++ G+I +W+ EKI H++ N L P EHPVL +E+ N + ++ +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR-EKLTEIMFEKFQV 152
Query: 505 PXMYVAIQAVLSLYASGSYH 564
P Y++ VLS +A G H
Sbjct: 153 PAYYLSKNVVLSCFAQGRTH 172
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 566 GIVLDSGDGVSHTVPIYEGYALPHAILRSGLGWSRL-DRLPHEDPHREGLLVHHHR*EGN 742
G+++DSG + VP+++GYA+ HA+++ +G + ++L ++ ++ +R G
Sbjct: 173 GLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGK 232
Query: 743 RS*HQGEALXCRPR 784
++GEA PR
Sbjct: 233 EEVNEGEAPKWTPR 246
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +1
Query: 148 NGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQSKXGILTLKYPI 327
NG K G +PR V SIV + +H+ V + E K + ++ PI
Sbjct: 10 NGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQE----ECSDKFSLFYVR-PI 63
Query: 328 EHGIITNWDDMEKIWHHTF 384
E G + NWD ++IW TF
Sbjct: 64 ERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +1
Query: 148 NGSGMCKAGFAGXXAPRAVFPSIVGRPRHQGVMVGMGQXDSYVGXEAQSKXGILTLKYPI 327
NG K G +PR V SIV + +H+ V + E K + ++ PI
Sbjct: 10 NGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQE----ECSDKFSLFYVR-PI 63
Query: 328 EHGIITNWDDMEKIWHHTF 384
E G + NWD ++IW TF
Sbjct: 64 ERGYVVNWDTQQQIWEKTF 82
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +3
Query: 558 VPPVSCSTPEMVSPTPYPSTK---VTLCPTPSSGLD 656
+PPVS TP MVSP P P K ++ +P S LD
Sbjct: 960 IPPVS--TPIMVSPQPIPIPKPVDASIAKSPRSELD 993
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 257 PIPTITPWWRGRPTMDGKTARGAXXPAKPALHMPEPL 147
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 561 PPVSCSTPEMVSPTPYPSTKVTLCPTPSSGLDLAGRDLT 677
PP+ E PTP P+T T+ PT + L + T
Sbjct: 67 PPIGNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTT 105
>Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 561 PPVSCSTPEMVSPTPYPSTKVTLCPTPSSGLDLAGRDLT 677
PP+ E PTP P+T T+ PT + L + T
Sbjct: 64 PPIGNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTT 102
>Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 561 PPVSCSTPEMVSPTPYPSTKVTLCPTPSSGLDLAGRDLT 677
PP+ E PTP P+T T+ PT + L + T
Sbjct: 67 PPIGNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTT 105
>Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 561 PPVSCSTPEMVSPTPYPSTKVTLCPTPSSGLDLAGRDLT 677
PP+ E PTP P+T T+ PT + L + T
Sbjct: 64 PPIGNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTT 102
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/68 (25%), Positives = 23/68 (33%)
Frame = +3
Query: 447 PQGPTGEKMTQIMFETFNSPXHVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVT 626
P GP + + P H PG + V PP+ P P P T +
Sbjct: 74 PHGPPPPHLLHALPHPAYPPGHPLHMPGMTMMPMGPVGPPMMAGMPMRPMPPLPPMTPMG 133
Query: 627 LCPTPSSG 650
P P+ G
Sbjct: 134 SMPHPNDG 141
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 307 GYXSCSGPRHPRRSLXGPYRPSRPGGEG 224
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 307 GYXSCSGPRHPRRSLXGPYRPSRPGGEG 224
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 307 GYXSCSGPRHPRRSLXGPYRPSRPGGEG 224
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 307 GYXSCSGPRHPRRSLXGPYRPSRPGGEG 224
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 307 GYXSCSGPRHPRRSLXGPYRPSRPGGEG 224
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>AF003134-5|AAB54139.1| 357|Caenorhabditis elegans Nek (never in
mitosis kinase) likeprotein 2 protein.
Length = 357
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 504 PXHVRRHPGRALAVRLRVVPPVSCSTPEMVSPTPYPSTKVT-LCPTPS---SGLDLAGR 668
P +R P +L+ RLR P S P +S P+T +T L P PS SG +GR
Sbjct: 284 PPTDKRKPSASLSSRLRTYPTQSTLRPYSLSSNA-PTTHLTQLTPMPSHIDSGFFSSGR 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,928,770
Number of Sequences: 27780
Number of extensions: 314454
Number of successful extensions: 1265
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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