Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N11
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.70 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.6  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 594 LSVFINCW*PTTW*SSVNKFFSTPHAKKSWTACSACWVG 478
           +S FI CW P    + V  F   P A  ++ +    W+G
Sbjct: 378 MSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 78  KDVGCTVSIIFWCSW 122
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 78  KDVGCTVSIIFWCSW 122
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 78  KDVGCTVSIIFWCSW 122
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 391 RSFINFSVASSHE*IAQVLE 332
           RSF+ FS+  S + +A+V++
Sbjct: 296 RSFVPFSIERSSQSVAEVMD 315


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 457 WRLXGEAADPAGTTGGP 507
           W    E  DPAG   GP
Sbjct: 395 WFTYQETVDPAGCNAGP 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,713
Number of Sequences: 438
Number of extensions: 4999
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)