Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N10
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104964-1|AAI04965.1| 1453|Homo sapiens CD163 molecule-like 1 p...    31   7.3  
BC104962-1|AAI04963.1| 1453|Homo sapiens scavenger receptor cyst...    31   7.3  
AY358856-1|AAQ89215.1|  727|Homo sapiens scavenger receptor hlg ...    31   7.3  
AF264014-1|AAF91396.1| 1453|Homo sapiens scavenger receptor cyst...    31   7.3  

>BC104964-1|AAI04965.1| 1453|Homo sapiens CD163 molecule-like 1
           protein.
          Length = 1453

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 825 PTNIERVDSDDCFCHQXYWPLCXSCLXKSDGLFLLPSSSKSNEECKKV-GPGRTA*TVPI 649
           P N   +D   C CHQ  +    +C+   +  FL+ S + ++ E + V G G  + TV +
Sbjct: 4   PQNSWHIDFGRCCCHQNLFSAVVTCILLLNSCFLISSFNGTDLELRLVNGDGPCSGTVEV 63


>BC104962-1|AAI04963.1| 1453|Homo sapiens scavenger receptor
           cysteine-rich type 1 protein M160, precursor protein.
          Length = 1453

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 825 PTNIERVDSDDCFCHQXYWPLCXSCLXKSDGLFLLPSSSKSNEECKKV-GPGRTA*TVPI 649
           P N   +D   C CHQ  +    +C+   +  FL+ S + ++ E + V G G  + TV +
Sbjct: 4   PQNSWHIDFGRCCCHQNLFSAVVTCILLLNSCFLISSFNGTDLELRLVNGDGPCSGTVEV 63


>AY358856-1|AAQ89215.1|  727|Homo sapiens scavenger receptor hlg
           protein.
          Length = 727

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 825 PTNIERVDSDDCFCHQXYWPLCXSCLXKSDGLFLLPSSSKSNEECKKV-GPGRTA*TVPI 649
           P N   +D   C CHQ  +    +C+   +  FL+ S + ++ E + V G G  + TV +
Sbjct: 4   PQNSWHIDFGRCCCHQNLFSAVVTCILLLNSCFLISSFNGTDLELRLVNGDGPCSGTVEV 63


>AF264014-1|AAF91396.1| 1453|Homo sapiens scavenger receptor
           cysteine-rich type 1 protein M160 precursor protein.
          Length = 1453

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 825 PTNIERVDSDDCFCHQXYWPLCXSCLXKSDGLFLLPSSSKSNEECKKV-GPGRTA*TVPI 649
           P N   +D   C CHQ  +    +C+   +  FL+ S + ++ E + V G G  + TV +
Sbjct: 4   PQNSWHIDFGRCCCHQNLFSAVVTCILLLNSCFLISSFNGTDLELRLVNGDGPCSGTVEV 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,909,383
Number of Sequences: 237096
Number of extensions: 2788726
Number of successful extensions: 4830
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4829
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)