Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_N10
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 50 2e-06
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 50 2e-06
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 46 3e-05
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 43 3e-04
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 43 3e-04
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 43 3e-04
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 43 3e-04
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 43 3e-04
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 43 3e-04
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 43 3e-04
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 42 4e-04
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 42 4e-04
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 42 4e-04
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 42 6e-04
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 42 6e-04
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 42 6e-04
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 42 6e-04
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 42 8e-04
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 41 0.001
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 39 0.005
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 39 0.005
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 39 0.005
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 38 0.010
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 37 0.017
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 37 0.017
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 37 0.022
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 35 0.089
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.27
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 33 0.27
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41034-1|AAN72428.1| 117|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23183-1|AAY86251.1| 117|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 29 4.4
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 29 4.4
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 29 4.4
Z78414-2|CAB01668.3| 308|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin prot... 29 5.8
AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin prot... 29 5.8
AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin prot... 29 5.8
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.7
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 28 7.7
AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006833-7|AAF60945.1| 289|Caenorhabditis elegans Hypothetical ... 28 7.7
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +3
Query: 588 PQPILVSGDDNDEKRIH-SYYQWVPFMLFFQGLLFYIPHWIWKNWEEGKVRLISXGMXXT 764
P+ + GD D ++ YYQWVP +L Q +FY+P WIW + + +
Sbjct: 82 PERSEIPGDVEDRQKAEIGYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFPSVISEA 141
Query: 765 MASIXDDKNNRQ---NRLVQYLLDTLHMHNTYSFGYFF 869
A D R N+LV ++ D L + +G F+
Sbjct: 142 EALRSQDSETRTKGVNKLVDFIGDILDTRSKNEYGRFY 179
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +3
Query: 588 PQPILVSGDDNDEKRIH-SYYQWVPFMLFFQGLLFYIPHWIWKNWEEGKVRLISXGMXXT 764
P+ + GD D ++ YYQWVP +L Q +FY+P WIW + + +
Sbjct: 82 PERSEIPGDVEDRQKAEIGYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFPSVISEA 141
Query: 765 MASIXDDKNNRQ---NRLVQYLLDTLHMHNTYSFGYFF 869
A D R N+LV ++ D L + +G F+
Sbjct: 142 EALRSQDSETRTKGVNKLVDFIGDILDTRSKNEYGRFY 179
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIWK--NWEEG 728
E R YYQWVPF+L + LLFY+P +W+ +W+ G
Sbjct: 95 ENRQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQSG 131
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 389 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC--ISDGANP-GHVINTFCWITYT 559
V D+++ +++Y T+AI+ + ILV+A +G PI C + P +CW+ T
Sbjct: 19 VDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNT 78
Query: 560 FTMP 571
+ +P
Sbjct: 79 YFLP 82
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIWK--NWEEG 728
E R YYQWVPF+L + LLFY+P +W+ +W+ G
Sbjct: 95 ENRQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQSG 131
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 389 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC--ISDGANP-GHVINTFCWITYT 559
V D+++ +++Y T+AI+ + ILV+A +G PI C + P +CW+ T
Sbjct: 19 VDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNT 78
Query: 560 FTMP 571
+ +P
Sbjct: 79 YFLP 82
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 43.2 bits (97), Expect = 3e-04
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIWK 713
YYQWVP++ Q LFYIP +IWK
Sbjct: 104 YYQWVPYVFALQAFLFYIPRFIWK 127
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +2
Query: 335 LVSSVAGFVKVRYLIDKAVID---NMVFRMHYRITSAILFLCCILVTANNLIGEPIACIS 505
+ S V V LI + + ++ R++ R+T IL + L+ +++ IG+PI C +
Sbjct: 1 MASQVGAINSVNALISRVFVQPKGDLADRLNSRVTVVILAVSSALLLSSHFIGDPITCWT 60
Query: 506 D---GANPGHVINTFCWITYTFTMP 571
A + +N +C++ T+ +P
Sbjct: 61 PAQFNAQWVNFVNQYCFVHGTYFVP 85
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 43.2 bits (97), Expect = 3e-04
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIWK 713
YYQWVP++ Q LFYIP +IWK
Sbjct: 78 YYQWVPYVFALQAFLFYIPRFIWK 101
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +2
Query: 410 RMHYRITSAILFLCCILVTANNLIGEPIACISD---GANPGHVINTFCWITYTFTMP 571
R++ R+T IL + L+ +++ IG+PI C + A + +N +C++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP 59
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 591 QPILVSGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
Q I V + + ++I SYYQWVPF L Q L+YIP +W+
Sbjct: 120 QDIPVDISEREYRQI-SYYQWVPFFLLLQAFLYYIPCLMWR 159
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 621 DEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK--NWEEG 728
+EK + SYYQWV F+L F LFY+P+ W NW G
Sbjct: 92 EEKEL-SYYQWVQFILVFLAFLFYLPYLYWSTVNWWSG 128
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 603 VSGDDNDEKRIH--SYYQWVPFMLFFQGLLFYIPHWIWK 713
V+G +DEKR SYYQWVPF L + F +P +WK
Sbjct: 85 VAGLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLWK 123
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 603 VSGDDNDEKRIH--SYYQWVPFMLFFQGLLFYIPHWIWK 713
V+G +DEKR SYYQWVPF L + F +P +WK
Sbjct: 85 VAGLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLWK 123
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +2
Query: 395 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC-ISDGANPG--HVINTFCWITYTFT 565
D+ V R++Y T IL +CC++++A G PI C ++ + I ++CWI T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 566 MP 571
+P
Sbjct: 81 IP 82
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 621 DEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
+EK+I YYQWVPF+L + L+F +P W+
Sbjct: 95 EEKQI-GYYQWVPFILIAEALMFSLPCIFWR 124
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +2
Query: 395 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC-ISDGANPG--HVINTFCWITYTFT 565
D+ V R++Y T IL +CC++++A G PI C ++ + I ++CWI T+
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 96
Query: 566 MP 571
+P
Sbjct: 97 IP 98
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 621 DEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
+EK+I YYQWVPF+L + L+F +P W+
Sbjct: 111 EEKQI-GYYQWVPFILIAEALMFSLPCIFWR 140
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 389 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 559
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 560 FTMPNTTS 583
+ +P T++
Sbjct: 77 YYLPLTSA 84
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWK---NWEEG 728
SYYQWVPF+L + L FYIP +W+ +W G
Sbjct: 98 SYYQWVPFVLALEALCFYIPCIMWRGLLHWHSG 130
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 389 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 559
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 560 FTMPNTTS 583
+ +P T++
Sbjct: 77 YYLPLTSA 84
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWK---NWEEG 728
SYYQWVPF+L + L FYIP +W+ +W G
Sbjct: 98 SYYQWVPFVLALEALCFYIPCIMWRGLLHWHSG 130
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 389 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 559
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 560 FTMPNTTS 583
+ +P T++
Sbjct: 77 YYLPLTSA 84
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWK---NWEEG 728
SYYQWVPF+L + L FYIP +W+ +W G
Sbjct: 98 SYYQWVPFVLALEALCFYIPCIMWRGLLHWHSG 130
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWKNWEE----GKVRLISXGMXXTMASIXDDKNNRQNR 806
+YYQWVPF FQ F +P W W ++ ++ + + +R
Sbjct: 102 NYYQWVPFFFAFQVCCFLLPFWCWAYMQKLIYIDMAFIVDYSGKINSEKTFEKTKEKVDR 161
Query: 807 LVQYLLDTLHMHNTYSFGY 863
+V Y+ D + GY
Sbjct: 162 IVNYMHDHFKFRRAHKMGY 180
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWKNWEE----GKVRLISXGMXXTMASIXDDKNNRQNR 806
+YYQWVPF FQ F +P W W ++ ++ + + +R
Sbjct: 102 NYYQWVPFFFAFQVCCFLLPFWCWAYMQKLIYIDMAFIVDYSGKINSEKTFEKTKEKVDR 161
Query: 807 LVQYLLDTLHMHNTYSFGY 863
+V Y+ D + GY
Sbjct: 162 IVNYMHDHFKFRRAHKMGY 180
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIWKN---WEEG 728
YYQWVPF+L + LLFY+P +W+ W G
Sbjct: 219 YYQWVPFILAIEALLFYVPCILWRGLLYWHSG 250
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIWKN---WEEG 728
YYQWVPF+L + LLFY+P +W+ W G
Sbjct: 219 YYQWVPFILAIEALLFYVPCILWRGLLYWHSG 250
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 41.9 bits (94), Expect = 6e-04
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIWKNWEE 725
YYQW+P +L Q LFY+P IW+ + E
Sbjct: 106 YYQWIPIVLVLQAFLFYLPSIIWRTFNE 133
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 365 VRYLIDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC---ISDGANPGHVIN 535
VR A +++ R Y+ TS +L I++ A+ +G PI C
Sbjct: 9 VRKFQRSAESNDIADRFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAE 68
Query: 536 TFCWITYTFTMP 571
T+C+I T+ +P
Sbjct: 69 TYCFIKGTYFLP 80
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 377 IDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCW 547
++ V D+ V R+HY TS ++ + +LV+A +G PI C +CW
Sbjct: 19 LEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCW 78
Query: 548 ITYTFTMP 571
+ T+ +P
Sbjct: 79 VQNTYWVP 86
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 615 DNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
D+ E+R YYQWVPF+L L F+IP +W+
Sbjct: 96 DDRERRQIGYYQWVPFVLAVAALTFHIPSSVWR 128
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 377 IDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCW 547
++ V D+ V R+HY TS ++ + +LV+A +G PI C +CW
Sbjct: 19 LEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCW 78
Query: 548 ITYTFTMP 571
+ T+ +P
Sbjct: 79 VQNTYWVP 86
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 615 DNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
D+ E+R YYQWVPF+L L F+IP +W+
Sbjct: 96 DDRERRQIGYYQWVPFVLAVAALTFHIPSSVWR 128
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 582 LKPQPILVSGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
+ P + + + E YYQWVPF+L Q +LFY+P W+
Sbjct: 77 ISPDKYIPDSEIDREGAEIGYYQWVPFILGLQAILFYLPSLFWR 120
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 395 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC 499
D+ + R++Y T +L + + ++A +G+PI C
Sbjct: 17 DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQC 51
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIWK 713
YYQWVPF+L Q +LFY P IW+
Sbjct: 111 YYQWVPFILALQAMLFYFPVVIWR 134
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 618 NDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK-NWEEGKVRL 740
N E + SYYQWVPF L + FY P IW+ +++ +RL
Sbjct: 117 NREYTMVSYYQWVPFFLVYVAFSFYAPCLIWRLFYDKSGIRL 158
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 395 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC 499
D++ R+HY T+ L L +L++ G PI C
Sbjct: 45 DDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIEC 79
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWK 713
SYYQWVPF L Q F P ++WK
Sbjct: 102 SYYQWVPFFLLLQAAFFRAPSYLWK 126
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 395 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 565
D+ R++Y +T IL +L++ G PI C+ PG +CW T+
Sbjct: 20 DDWSDRLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYF 79
Query: 566 MPNT 577
+ T
Sbjct: 80 VEPT 83
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIW 710
E + YYQWVPF+LF ++ YIP IW
Sbjct: 92 ENKELKYYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIW 710
E + YYQWVPF+LF ++ YIP IW
Sbjct: 92 ENKELKYYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIW 710
E + YYQWVPF+LF ++ YIP IW
Sbjct: 92 ENKELKYYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIW 710
E R YYQWVPF+L Q L F +P W
Sbjct: 96 EGREMIYYQWVPFLLVIQALFFCVPRAFW 124
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 37.1 bits (82), Expect = 0.017
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIW 710
+YY+WVP +L FQ +F +P+ +W
Sbjct: 102 NYYRWVPLVLLFQAAMFVLPYHLW 125
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 410 RMHYRITSAILFLCCILVTANNLIGEPIACIS----DGANPGHVINTFCWITYTFTMPNT 577
R++ T +L + ++ G+PI C + G+ G+V + FC+I T+ +PN
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYV-HDFCFIENTYFVPNG 88
Query: 578 TSKT 589
T T
Sbjct: 89 TEVT 92
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 37.1 bits (82), Expect = 0.017
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIW 710
+YY+WVP +L FQ +F +P+ +W
Sbjct: 102 NYYRWVPLVLLFQAAMFVLPYHLW 125
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 410 RMHYRITSAILFLCCILVTANNLIGEPIACIS----DGANPGHVINTFCWITYTFTMPNT 577
R++ T +L + ++ G+PI C + G+ G+V + FC+I T+ +PN
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYV-HDFCFIENTYFVPNG 88
Query: 578 TSKT 589
T T
Sbjct: 89 TEVT 92
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 36.7 bits (81), Expect = 0.022
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWK 713
SYYQW+ F L F+ F +P +IWK
Sbjct: 120 SYYQWMSFFLLFEAACFRLPCFIWK 144
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 34.7 bits (76), Expect = 0.089
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 639 SYYQWVPFMLFFQGLLFYIPHWIWK 713
+YYQW PF++F Q + +P +WK
Sbjct: 109 TYYQWTPFIIFLQVAMCLVPALMWK 133
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 395 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHVINTF 541
DN R+ + T IL LV++N + G+PI C+ P N F
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYF 68
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIW 710
YYQW PF++ + FY+P W
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFW 119
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 642 YYQWVPFMLFFQGLLFYIPHWIW 710
YYQW PF++ + FY+P W
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFW 119
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
E+ +YYQW L G+ F IP +IW+
Sbjct: 95 ERHRLTYYQWSSMYLAVAGIAFMIPKFIWR 124
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 624 EKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 713
E+ +YYQW L G+ F IP ++W+
Sbjct: 95 ERHRLTYYQWSSMYLAVAGIAFMIPKFLWR 124
>U41034-1|AAN72428.1| 117|Caenorhabditis elegans Hypothetical
protein M02D8.6 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 458 LVTANNLIGEPIACISDGANPGHVINTFCWIT 553
++T N G P D NP ++IN+FC+I+
Sbjct: 51 VITYNGKTG-PTTVFKDDPNPNNLINSFCYIS 81
>U23183-1|AAY86251.1| 117|Caenorhabditis elegans Hypothetical
protein K01A12.4 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 458 LVTANNLIGEPIACISDGANPGHVINTFCWIT 553
++T N G P D NP ++IN+FC+I+
Sbjct: 51 VITYNGKTG-PTTVFKDDPNPNNLINSFCYIS 81
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 766 WPVXLMTKTIVRIDSFNICWIRCTCTTLTPSVTSSC 873
W V +T V S N + C C P VT SC
Sbjct: 241 WGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSC 276
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 766 WPVXLMTKTIVRIDSFNICWIRCTCTTLTPSVTSSC 873
W V +T V S N + C C P VT SC
Sbjct: 224 WGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSC 259
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 766 WPVXLMTKTIVRIDSFNICWIRCTCTTLTPSVTSSC 873
W V +T V S N + C C P VT SC
Sbjct: 258 WGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSC 293
>Z78414-2|CAB01668.3| 308|Caenorhabditis elegans Hypothetical
protein W09D12.2 protein.
Length = 308
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 618 NDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWKNWEEGKVRLISXGMXXTM 767
N EK YY VP F L P WI+ N+ KV L+ + T+
Sbjct: 115 NSEKHWGRYYLLVPIFGFVYSFLVISPWWIFGNF-MAKVDLVDGKLHTTV 163
>AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin protein
5, isoform c protein.
Length = 175
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 380 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 261
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 4 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 43
>AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin protein
5, isoform b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 380 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 261
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 88 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 127
>AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin protein
5, isoform a protein.
Length = 367
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 380 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 261
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 88 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 127
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 552 RTHSPCRILHLKPQPILVSGDDNDEKRIHSYYQWVPFML----FFQGLLFYIPHWI 707
R HS R LK SGDD E+R+H P L FF LLF IP W+
Sbjct: 341 REHS--RQFILKDVTFESSGDD--EQRLHYTITQTPQYLLLHFFFPALLFLIPPWL 392
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 628 FSSLSSPETRMGCGFRCSIRHGECVRDPAERID 530
+SSL PETR C + ++R G + D + D
Sbjct: 657 YSSLDLPETRALCVYEIAVREGRTIFDQHQGTD 689
>AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical
protein M04G7.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 666 LFFQGLLFYIPHWIWKNWEEGKV 734
L ++G I HW+WK W + +V
Sbjct: 413 LSYEGETRLITHWLWKEWPDWQV 435
>AC006833-7|AAF60945.1| 289|Caenorhabditis elegans Hypothetical
protein ZK616.7 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 666 LFFQGLLFYIPHWIWKNWEEGKV 734
L ++G I HW+WK W + +V
Sbjct: 152 LSYEGETRLITHWLWKEWPDWQV 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,154,979
Number of Sequences: 27780
Number of extensions: 444122
Number of successful extensions: 1179
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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