Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N10
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    27   0.17 
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    26   0.40 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   2.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   3.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   8.6  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 849 KCCACATYPTNIERVDSDDCFCHQXY 772
           KC  C+TY +N E V  ++C  +Q Y
Sbjct: 149 KCDKCSTYQSNGEEVCLENCTGYQQY 174


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 525 CPGLAPSLMQAMGSPIRLLAVTSMQQRNSMADV 427
           CPG+A S    MGSP R L     +   S+  V
Sbjct: 204 CPGMALSQFDLMGSPYRNLTFVRREGEFSVLQV 236


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 84  DTPAACESETTNAKLKEC 31
           D P  CE +T N+K K C
Sbjct: 430 DPPIGCECKTCNSKTKCC 447


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 597 WAAVLDVVFGMVNVYVIQQNVLI 529
           W  V  +V  +VNV V+  NVL+
Sbjct: 64  WILVTLIVLAIVNVMVVLGNVLV 86


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 786 KNNRQNRLVQYLLDTLHMHNTYSFGYF 866
           KNN+QN L+      L  H+     YF
Sbjct: 186 KNNQQNILIPVNYSALLSHDEQQLSYF 212


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 491 IACISDGANPGHVINTFCWITYTFTMPNTTSKTAA 595
           +  ISD      + N + W    F  PN  +K AA
Sbjct: 12  LLAISDSQAQEKLKNIYSWKALEFAFPNGYAKLAA 46


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 780 DDKNNRQNRLVQYLLDTLHMHNTYSFGYFFXRS 878
           D KNN  N  V++ L T  +  T   GYF   S
Sbjct: 52  DTKNNLLNAYVRFKLVTDCIFVTSEPGYFLYTS 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,121
Number of Sequences: 438
Number of extensions: 4945
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)