Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_N03
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 38 0.001
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 34 0.022
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.16
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.83
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 29 0.83
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.5
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 2.5
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 3.4
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 38.3 bits (85), Expect = 0.001
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 3/114 (2%)
Frame = +2
Query: 437 NPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGCQNGHCSGRECVCRD 616
NP C+ K +LC + C+ H KNAG C + + C+G C
Sbjct: 338 NP-CCDGKTCKLTKGSLCDDQQDACCYQCHFKNAGTLCRQSTNPCDKPEFCTGISSKCPV 396
Query: 617 GFKLDYGRKYCVPACSNNCAGVGNCTSPNR-CDCAPGYQ--TXHDGSCSPQCRD 769
D GR C + G CTS +R C + + H SC C++
Sbjct: 397 DENWDDGR-ICQDSLGMGSCASGVCTSASRQCKKLTNFSSLSCHSDSCKVSCQN 449
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 34.3 bits (75), Expect = 0.022
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 429 TSTTLTFASRTAAKDASTH-CARRPKSARASLTTSRTPAASA--SLHARLDVKMATAPVE 599
T+T S+ A H AR+P S TT TPA SA S HAR K A+AP
Sbjct: 464 TTTASKRVSKHDKASAEKHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQASAPSS 523
Query: 600 SASAGMAL 623
+ A+
Sbjct: 524 PGTTSAAV 531
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.5 bits (68), Expect = 0.16
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 429 TSTTLTFASRTAAKDASTHCARRP-KSARASLTTSRTPAASASLHARLDVKMATAPVESA 605
TS++L +S T++ AS+ S+ + TTS TP +SA+ + + + S+
Sbjct: 135 TSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSS 194
Query: 606 SAGMALN*TTDVNTVCQLAVTTA 674
A +LN TT +TA
Sbjct: 195 LASSSLNSTTSATATSSSLSSTA 217
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 429 TSTTLTFASRTAAKDASTHCARRPKSARASLTT--SRTPAASASLHARLDVKMATAPVES 602
TS+T + S +++ +S+ + RP S+ + +TT S T ++ ++ ++ V S
Sbjct: 211 TSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSEVPS 270
Query: 603 ASAGMALN 626
++A +ALN
Sbjct: 271 STAALALN 278
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 29.1 bits (62), Expect = 0.83
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 645 TVCQLAVTTAPVSVIALHQTDATAHLVIRQXTMDRAVHNVAIARPMLVL 791
++ Q+ + T P I D T ++ Q +DR +HN AI P+ VL
Sbjct: 325 SITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPINVL 373
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 28.3 bits (60), Expect = 1.5
Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Frame = +3
Query: 306 EYVISKYLQLNLSRIRGRYLKETDPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTH 485
E + ++ Q N+ + G + S+S V + ++ ++T T +S +++ +S+
Sbjct: 99 EQIYAQSQQFNI--VEGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSS 156
Query: 486 CARRPKSARA---SLTTSRTPAASASLHARLDVKMATAP--------VESASAGMALN*T 632
+ + S+ + S ++SRT + + H + P + +A+ G N T
Sbjct: 157 SSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYRPTVFPYTTISHYNITNATNGTYCNGT 216
Query: 633 TDVNTVCQLAVTTAPVSVIALHQTDAT 713
N C + + A S L+ T++T
Sbjct: 217 NGTNFTCIVNASNATNSTFWLNGTNST 243
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 653 PACSNNCAGVGNCTSPNRCDCAPGY 727
P+ C C SPN +C PGY
Sbjct: 365 PSLCRTCPPNAICPSPNYVECKPGY 389
>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 177
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 416 GYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGF 547
G NI+ N P ++ + +L TA CFP KN G F
Sbjct: 85 GMAGNIFARNRIAP--ARWLITSLSTAATFMFCFPKTSKNIGAF 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,131,333
Number of Sequences: 5004
Number of extensions: 64499
Number of successful extensions: 200
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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