Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N03
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.054
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    27   0.29 
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           27   0.29 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    26   0.38 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.50 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.7  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   4.7  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        23   4.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   6.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   8.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 29.1 bits (62), Expect = 0.054
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +3

Query: 369 ETDPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTPAAS 548
           E+  G   AS   A + T G +TTL  AS T    A+        +A A++TT  T   +
Sbjct: 205 ESKAGSTDAS-TPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIPT 263

Query: 549 ASLHAR 566
             L  R
Sbjct: 264 RRLRKR 269



 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 132 GSCWYPPAVSTRSRGSKVATEVAASKITPM 221
           GS  YP + +T + G+K  TE  A   TP+
Sbjct: 322 GSREYPTSNATDTDGTKERTEEVALDRTPV 351


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 26.6 bits (56), Expect = 0.29
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 548 CIATC-PIGCQNGHCSGRECVCR 613
           C A C  +G   GHC    C+CR
Sbjct: 60  CAANCLSLGKAGGHCEKGVCICR 82


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 26.6 bits (56), Expect = 0.29
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 548 CIATC-PIGCQNGHCSGRECVCR 613
           C A C  +G   GHC    C+CR
Sbjct: 35  CAANCHSLGKAGGHCEKGVCICR 57


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 548 CIATC-PIGCQNGHCSGRECVCR 613
           C A C  +G   GHC    C+CR
Sbjct: 60  CAANCLSLGKAGGHCEKVGCICR 82


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 384 PISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTP 539
           P S+   L+A AT  TST+   AS TAA    + C       +  +  S+ P
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMELQVDIADSQQP 874


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +2

Query: 671 CAGVGNCTSPNR-CDCAPGYQTXHDGSCSPQCRDC 772
           C G G    P+  C C PGYQ   +     +C +C
Sbjct: 234 CKGDGKWYLPSGGCHCKPGYQADVE---KQECTEC 265


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 380 RPDLSVIRSCCNGYVRNIYNPNI-CEP 457
           R  + ++ +CC G VR  Y P   C+P
Sbjct: 399 RAFVRILCACCPGRVRRRYQPAFRCKP 425


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 317 IEVPTAQLVEDQRQIPKGNGSRPD 388
           I+V T Q++ED  Q  K    RP+
Sbjct: 615 IDVKTVQVIEDAAQKKKHRAIRPE 638


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 303 ISLMVLTVWFCDRKPWLVL 247
           ++LM +++WF    P+LV+
Sbjct: 279 VALMTISLWFMAWTPYLVI 297


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 303 ISLMVLTVWFCDRKPWLVL 247
           ++LM +++WF    P+LV+
Sbjct: 29  VALMTISLWFMAWTPYLVI 47


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 802 TFRSNTSIGRAIATLWTARSIVXCLITRCAVASV 701
           T   NT +  A+ T    RS+  C ++  A A +
Sbjct: 51  TIVGNTLVIAAVITTRRLRSVTNCFVSSLAAADL 84


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 147 PPAVSTRSRGSKVATEVAASKITPMKTSPNFTGTTP 254
           P   S  S  S  A   AA        SP+ TG++P
Sbjct: 34  PATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSP 69


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 765 AIARPMLVLLRNVCSGPTXIPLP 833
           A ++  L  LRNV S    IPLP
Sbjct: 206 AASKAALAKLRNVHSSSFCIPLP 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,905
Number of Sequences: 438
Number of extensions: 5037
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)