Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_N02
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    53   3e-09
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    50   2e-08
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   1.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    25   1.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 52.8 bits (121), Expect = 3e-09
 Identities = 28/88 (31%), Positives = 45/88 (51%)
 Frame = +2

Query: 344 LPKNLEFSIFYEKMREXAXALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIXIIQ 523
           L ++  FS+F  K R  A  L  +F   ++ +     A YAR  +N  +F YA  + I+ 
Sbjct: 74  LERDANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLFSYALSVAILH 133

Query: 524 RSDTXXFVLPAPYEAYPQYFVNMEVXNK 607
           R DT    LP+  E++P  +V+ +V  K
Sbjct: 134 RQDTQDIDLPSFIESFPDKYVDSKVFAK 161


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 50.0 bits (114), Expect = 2e-08
 Identities = 24/85 (28%), Positives = 44/85 (51%)
 Frame = +2

Query: 344 LPKNLEFSIFYEKMREXAXALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIXIIQ 523
           L ++  FS+F  K R+ A  L ++F  A+  +     A + R  +N  +F YA+ + ++ 
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 524 RSDTXXFVLPAPYEAYPQYFVNMEV 598
           R DT    LP+    +P  +V+ +V
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQV 158


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = +3

Query: 387 GKXPSRCSSCS---IMPKILNVSTKQHATPEST*TRECSY 497
           G  P +C+ C    +   +LN   K H+       R+CSY
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 294


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = +3

Query: 387 GKXPSRCSSCS---IMPKILNVSTKQHATPEST*TRECSY 497
           G  P +C+ C    +   +LN   K H+       R+CSY
Sbjct: 13  GSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 374  YEKMREXAXALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIXII 520
            Y+K +     + +  YYA  F     T+ +  ++   G FL  Y+I +I
Sbjct: 1203 YKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFL-GYFIGLI 1250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,428
Number of Sequences: 336
Number of extensions: 1977
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)