Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_M23
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     50   3e-06
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    41   0.002
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           39   0.005

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 33/53 (62%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           P+A D+   L SVG+EA  E L+ +  EL G  +  +IAAGR   +S+P GGG
Sbjct: 18  PSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           P+A D+   L SVG E     ++ +  +L G  +  +IA+GR   +S+P GGG
Sbjct: 211 PSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           P A D+   L SVG E     ++ +  ++ G  +  LIA GR   +S+P GGG
Sbjct: 18  PTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVPSGGG 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,522,408
Number of Sequences: 37544
Number of extensions: 111836
Number of successful extensions: 135
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)