Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_M23
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    54   3e-07
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    54   3e-07
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    54   3e-07
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    54   3e-07
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    54   3e-07

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 32/53 (60%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           PA +D+   L SVG+E  AE L  V  EL G  +  LI  GR  LSSMPVGGG
Sbjct: 18  PANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 32/53 (60%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           PA +D+   L SVG+E  AE L  V  EL G  +  LI  GR  LSSMPVGGG
Sbjct: 18  PANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 32/53 (60%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           PA +D+   L SVG+E  AE L  V  EL G  +  LI  GR  LSSMPVGGG
Sbjct: 18  PANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 31/53 (58%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           PA  D+   L SVG+E  AE L  V  EL G  +  LI  GR  LSSMPVGGG
Sbjct: 18  PANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 31/53 (58%)
 Frame = +3

Query: 177 PAAADVXXXLXSVGIEAXAEXLKXVXXELXGXXVXXLIAAGRXXLSSMPVGGG 335
           PA  D+   L SVG+E  AE L  V  EL G  +  LI  GR  LSSMPVGGG
Sbjct: 18  PANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,259,369
Number of Sequences: 53049
Number of extensions: 169670
Number of successful extensions: 235
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)