Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_M22
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical...    31   1.5  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.12a protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -3

Query: 516 NKSLPFIFVRLITSALKVPYFLKLLSPVLYTYIPSLLATYIV 391
           N +LP+IF+       +  Y+LK ++ V++  +PSLLA  ++
Sbjct: 42  NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLCVPSLLAMTVL 83


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -3

Query: 231 TKAPTTXSSVEYSSTLRCLKTEPLSTLEAVTLSPTTKM 118
           T+APTT + +  +     L+TE L T ++ T++P TK+
Sbjct: 798 TEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKTKI 835


>Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical
           protein C08F11.13 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +2

Query: 128 VGLSVTASKVLNGSVFRQRSVELYSTEDXVVGAFVISNAEKSDGKIYTIHA 280
           VG     +K  N +++    +++ ST   V+GAF+ S   K+ G+++ I A
Sbjct: 175 VGSHRWMNKYSNSTIWISIILQIASTFTLVIGAFIRSEDPKTSGRMFFIGA 225


>Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical
           protein T03F7.5 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 526 YGVKQIASVHFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 380
           + ++++ S+ F        + T+FFK F ++GF++      SYVY  VI+
Sbjct: 54  FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,169,252
Number of Sequences: 27780
Number of extensions: 239427
Number of successful extensions: 658
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)