Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_M20
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical pr...    32   0.61 
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p...    30   2.5  
AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   10.0 
L16685-4|ABA00185.1|  165|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical
           protein K09E9.1 protein.
          Length = 508

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 493 IGSVINLGAAAICFPIGLXMDAIGRKKTMLFLILPFTLGWLLITF 627
           + S++  GA    F  G   D +GRK   L  +L  T+G +L+TF
Sbjct: 118 MSSLLMWGALIGSFVCGFLSDRLGRKPVYLGCLLMITIGHILLTF 162


>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
           protein R05D3.1 protein.
          Length = 1053

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 657 PAYEHTDXRTKSYKKPAQSEREDEKQHSFFSSNSIHXQAN 538
           P+  HTD   +S++ P    ++ +K  SFFS N     A+
Sbjct: 464 PSLVHTDGFIQSFRTPLLKAKKGDKVRSFFSMNEYRKWAD 503


>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -1

Query: 678 AIPVMSXP---AYEHTDXRTKSYKKPAQSERE-DEKQHSFFSSNSIHXQANWKTNCSSTQ 511
           ++P  S P   + E  +  T S KKP++ E+E  +   +F   N    + ++K N S + 
Sbjct: 230 SVPQASSPDISSQEQPESSTSSSKKPSKKEKEPSDPMSTFVLDNWKKKKRDYKLNSSDSS 289

Query: 510 VDD 502
            DD
Sbjct: 290 DDD 292


>Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical
           protein T11G6.2b protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 211 NIYVPYLLVQYFCVLARQTQTAGWPISVSLKQNW 312
           + Y P ++  +  +L    Q+ GWP+ VS+  NW
Sbjct: 135 HFYSP-MVYSFLWILNGFIQSVGWPVEVSIMGNW 167


>Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical
           protein T11G6.2a protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 211 NIYVPYLLVQYFCVLARQTQTAGWPISVSLKQNW 312
           + Y P ++  +  +L    Q+ GWP+ VS+  NW
Sbjct: 142 HFYSP-MVYSFLWILNGFIQSVGWPVEVSIMGNW 174


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -3

Query: 262 VSLAHKNIEQVGTVHRCF--TKIKKSPFR 182
           V LA KNI+Q+  VH CF   K+++  F+
Sbjct: 904 VQLAVKNIQQIRNVHSCFDHRKLRQLEFK 932


>L16685-4|ABA00185.1|  165|Caenorhabditis elegans Hypothetical
           protein ZC21.10 protein.
          Length = 165

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = -1

Query: 429 EHNWRRPTKHXXXXXXSKGSXLKQQCIEVTCDQNLPEDQPVLFERHRDWPSCRLCLSR*H 250
           +H W++ T+       SK +  K+   +   ++  PE+ P+  E    +PS R  L    
Sbjct: 34  KHQWKQITQRVLPYQKSKPTDFKKHGKKTARNKQFPENMPIKEEPLDSFPSIRCQLFPDD 93

Query: 249 TKILNK*VRYIDVSRKLKKALFGQRNXR 166
           + IL     Y +V  ++  A+ G    +
Sbjct: 94  SVILED---YTEVLNRVSNAIEGSEEKK 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,089,961
Number of Sequences: 27780
Number of extensions: 273628
Number of successful extensions: 753
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)