Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_M13
(1194 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 33 0.53
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.92
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.92
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.92
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 31 1.6
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 31 1.6
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 31 1.6
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 31 1.6
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 2.1
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 30 2.8
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 30 2.8
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 4.9
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 29 4.9
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 4.9
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 29 6.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 8.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 8.6
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 29 8.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 8.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 8.6
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 32.7 bits (71), Expect = 0.53
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDNXXSXIGRMXXEXXXLXNNLXXXPASPXXXA 344
YN ETK CE F+Y G N+N + + E N+ P P A
Sbjct: 607 YNAETKTCESFLYTGCQGNNNRFNSLN----ECQSYCKNINAEPKCPQGRA 653
Score = 29.1 bits (62), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YEYYSAYNQETKKCEEFIYXGXXXNDN 254
Y YY YN + K+C+ +++ G N N
Sbjct: 712 YRYY--YNNQAKECQSYLFLGCDGNSN 736
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.92
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSS 544
PPP P A +PP PP P P L +S
Sbjct: 236 PPPLPPVGAGAPPPPPPPPPPAQLMAS 262
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.92
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSS 544
PPP P A +PP PP P P L +S
Sbjct: 222 PPPLPPVGAGAPPPPPPPPPPAQLMAS 248
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.92
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSS 544
PPP P A +PP PP P P L +S
Sbjct: 222 PPPLPPVGAGAPPPPPPPPPPAQLMAS 248
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDN 254
+NQE+ +CE+F Y G NDN
Sbjct: 121 FNQESGECEKFFYYGCGGNDN 141
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDN 254
+NQE+ +CE+F Y G NDN
Sbjct: 121 FNQESGECEKFFYYGCGGNDN 141
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDN 254
+NQE+ +CE+F Y G NDN
Sbjct: 121 FNQESGECEKFFYYGCGGNDN 141
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 31.1 bits (67), Expect = 1.6
Identities = 34/106 (32%), Positives = 38/106 (35%)
Frame = -2
Query: 818 GDRGXXXXCEXXXGXXRXRXSWEXGXGXXG*SXSXXGALGRXRXRXXKGGGYXXRSXGXX 639
GDRG + G R R S + G G G G GR R GG+ RS
Sbjct: 467 GDRGGFRGRDRDGGGFRGR-SVDRG-GFRGGGGDRGGFRGRSSDRGGDRGGFRGRSGD-- 522
Query: 638 XEXXXXXXXXRRTXXXRXGXGGRXXRXXXGGLRXGERXAXWGXGGG 501
R R G GGR GG R G+R G GGG
Sbjct: 523 -----------RDGGFRGGFGGRGG----GGFRGGDRGGFRGRGGG 553
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 153 GLCVXA*YEYYSAYNQETKKCEEFIYXGXXXNDN 254
G C + Y+ YN++++KCE+F Y G N N
Sbjct: 430 GPCHGSFQRYF--YNEDSQKCEQFTYSGCGGNGN 461
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 180 YYSAYNQETKKCEEFIYXGXXXNDN 254
YY +++ TKKCE F Y G NDN
Sbjct: 282 YY--FDRVTKKCERFFYSGRDGNDN 304
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.5 bits (58), Expect(2) = 2.1
Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = +2
Query: 647 PXSAXSTPPPXIXSSSXSPAPPXXXDFIXXXPXXSPTTXSPSLXLXXSRXPPXXLDPLTS 826
P A PPP ++ P PP +P +P + + PP P
Sbjct: 104 PVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPPPPSAPACC 163
Query: 827 -XXXVXXSPXCPP 862
V +P C P
Sbjct: 164 VAAPVPTNPCCQP 176
Score = 21.8 bits (44), Expect(2) = 2.1
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXP 526
PPP P P P P P
Sbjct: 91 PPPPPASPCCGPSPVPAPCCP 111
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YEYYSAYNQETKKCEEFIYXGXXXNDN 254
Y YY YN +T++CE + Y G N N
Sbjct: 686 YRYY--YNSQTQECESYQYNGCDGNSN 710
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDNXXSXIGRMXXEXXXLXNNLXXXPAS 329
Y+Q+TK C F+Y G N N + L N PA+
Sbjct: 921 YDQQTKTCRPFVYNGLKGNQNNFISLRACQLSCQPLDNPCIGQPAT 966
Score = 29.1 bits (62), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDN 254
YNQ+T C++F Y G N N
Sbjct: 815 YNQQTGSCQQFTYSGLHGNQN 835
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDNXXSXIGRMXXEXXXLXNNLXXXPAS 329
Y+Q+TK C F+Y G N N + L N PA+
Sbjct: 1339 YDQQTKTCRPFVYNGLKGNQNNFISLRACQLSCQPLDNPCIGQPAT 1384
Score = 29.1 bits (62), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 192 YNQETKKCEEFIYXGXXXNDN 254
YNQ+T C++F Y G N N
Sbjct: 1233 YNQQTGSCQQFTYSGLHGNQN 1253
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 153 GLCVXA*YEYYSAYNQETKKCEEFIYXGXXXNDN 254
G C A Y+ YN T+ CE F Y G NDN
Sbjct: 454 GDCTSAVRRYW--YNAATRSCEMFQYTGCQGNDN 485
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YEYYSAYNQETKKCEEFIYXGXXXNDN 254
++YY YN +T+ CE F Y G N N
Sbjct: 646 FKYY--YNPQTQNCESFQYNGCDGNSN 670
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Frame = +2
Query: 572 APXVPXXHXXSFSXXXXXXXXXXSXPX----------SAXSTPPPXIXSSSXSPAPPXXX 721
AP P H SF S P S TPPP S +PAPP
Sbjct: 1188 APGAPPQHQGSFGAQFGVPPPQNSAPGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPAL 1247
Query: 722 DFIXXXPXXSPTTXSP 769
P +P T P
Sbjct: 1248 SVFQHSPQGAPITAPP 1263
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Frame = +2
Query: 572 APXVPXXHXXSFSXXXXXXXXXXSXPX----------SAXSTPPPXIXSSSXSPAPPXXX 721
AP P H SF S P S TPPP S +PAPP
Sbjct: 1208 APGAPPQHQGSFGAQFGVPPPQNSAPGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPAL 1267
Query: 722 DFIXXXPXXSPTTXSP 769
P +P T P
Sbjct: 1268 SVFQHSPQGAPITAPP 1283
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSS 544
PPP + + PP PP PT R S
Sbjct: 513 PPPSQQQQVVQPPIPPAPTTANGRRRS 539
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 982 PPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRX--LPPXXLSPPLPX 1155
PP + +S P SA L P P P + P P LPP PP P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 1156 APXXTP 1173
P P
Sbjct: 747 PPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 982 PPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRX--LPPXXLSPPLPX 1155
PP + +S P SA L P P P + P P LPP PP P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 1156 APXXTP 1173
P P
Sbjct: 747 PPGGLP 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 982 PPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRX--LPPXXLSPPLPX 1155
PP + +S P SA L P P P + P P LPP PP P
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Query: 1156 APXXTP 1173
P P
Sbjct: 330 PPGGLP 335
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/83 (25%), Positives = 28/83 (33%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSSGHXTXXFXYAPXVPXXHXXSFSXXXXXXXXXXS 643
PPP P+ P PP P L + G+ + P P S + S
Sbjct: 189 PPPPPK--GTGTPPPPPTGEPQDLSAEGYASR----RPPPPPKGTGSPTPPPTGEPQDLS 242
Query: 644 XPXSAXSTPPPXIXSSSXSPAPP 712
+A PPP + P PP
Sbjct: 243 GEGNASRRPPPPPKGTGSPPPPP 265
Score = 28.7 bits (61), Expect = 8.6
Identities = 23/83 (27%), Positives = 28/83 (33%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSSGHXTXXFXYAPXVPXXHXXSFSXXXXXXXXXXS 643
PPP P+ SPP PP P L G+ + P P S S
Sbjct: 127 PPPPPKGTG-SPP-PPPTGEPQDLSGEGNASR----RPPPPPKGTGSPPPPPTGEPQDLS 180
Query: 644 XPXSAXSTPPPXIXSSSXSPAPP 712
+A PPP + P PP
Sbjct: 181 TEGNASRRPPPPPKGTGTPPPPP 203
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 940 PSFRSXXPPXX*XXPPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRX 1119
P+ PP PP S P P A+ PR + P P S P PA
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPP---PPPTGSPPPPPAGGS 288
Query: 1120 LPPXXL-SPPLPXAPXXTP 1173
PP SPP P P +P
Sbjct: 289 PPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 940 PSFRSXXPPXX*XXPPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRX 1119
P+ PP PP S P P A+ PR + P P S P PA
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPP---PPPTGSPPPPPAGGS 309
Query: 1120 LPPXXL-SPPLPXAPXXTP 1173
PP SPP P P +P
Sbjct: 310 PPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 6.5
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 940 PSFRSXXPPXX*XXPPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRX 1119
P+ PP PP S P P A+ PR + P P S P PA
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPP---PPPTGSPPPPPAGGS 294
Query: 1120 LPPXXL-SPPLPXAPXXTP 1173
PP SPP P P +P
Sbjct: 295 PPPPRAGSPPPPPPPRGSP 313
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/57 (26%), Positives = 17/57 (29%)
Frame = +1
Query: 421 PHHPXXXXXXXXPXXPPXTXXXRXLSXPPPXPHXAXLSPXLRPPNXXLXLRPPXPXR 591
P H P P + PPP P P PP + PP P R
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQR 169
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 8.6
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Frame = +1
Query: 904 SPRXTPHPPXXXPSFRSXXPPXX*XX-PPXRXXISXPXPSASPHXLLXPRXXTXPFXXXX 1080
+P P PS+ S PP PP I P PS P + P
Sbjct: 447 APPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIA 506
Query: 1081 PXPSXDPXPARRXLPPXXLSPPLPXAP 1161
S P P PP L + P
Sbjct: 507 TPSSVPPPPPPPPPPPPALEQEISGPP 533
Score = 28.7 bits (61), Expect = 8.6
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = +2
Query: 653 SAXSTPPPXIXSSSXSPAPPXXXDFIXXXPXXSPTTXSPSLXLXXSRXPPXXLDPLTSXX 832
S ST PP ++ PAPP P P S S PP L P+ +
Sbjct: 460 SYSSTTPP----TTPKPAPPPPSRIPNPSPSPQPAEVSKS------PPPPPPLPPIATPS 509
Query: 833 XVXXSPXCPPP 865
V P PPP
Sbjct: 510 SVPPPPPPPPP 520
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 28.7 bits (61), Expect = 8.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 464 PPPXPRXXAISPPXPPXPTXPXSLRSSG 547
P P P SPP PP P SL +G
Sbjct: 344 PSPLPTTSGPSPPSPPAPPHEFSLHGAG 371
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/55 (25%), Positives = 19/55 (34%)
Frame = +1
Query: 982 PPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRXLPPXXLSPP 1146
PP P P P+ ++ P P P P R +PP + PP
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/55 (25%), Positives = 19/55 (34%)
Frame = +1
Query: 982 PPXRXXISXPXPSASPHXLLXPRXXTXPFXXXXPXPSXDPXPARRXLPPXXLSPP 1146
PP P P P+ ++ P P P P R +PP + PP
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,239,190
Number of Sequences: 27780
Number of extensions: 186140
Number of successful extensions: 1361
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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