Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_M11
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0905 + 25843547-25844314                                         32   0.56 
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143...    31   1.3  
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    30   2.3  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.9  

>06_03_0905 + 25843547-25844314
          Length = 255

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
 Frame = +1

Query: 796 PPTTYXLPXPHXPXFRXDPQXTSXEPPSTNPFXXXGSPL-YPPP 924
           PP TY  P    P     P  T   PP T P    G P+ YP P
Sbjct: 99  PPVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTP 142


>02_04_0056 +
           19313422-19313967,19314035-19314168,19314263-19314398,
           19314870-19314923,19314995-19315135,19315220-19315546,
           19315647-19315916,19316080-19316226,19316890-19317045,
           19317223-19317290,19318210-19318309,19318696-19318985,
           19319074-19319274,19319840-19319902,19320263-19320356,
           19320964-19321035,19321979-19322077,19322254-19322376
          Length = 1006

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +2

Query: 755 PHGXPXSXPXXXLNXLXPTXFPXPIXPASXXTLNXPHXSPPQXTPSR 895
           PHG P   P        P+  P P  PA   T   P  +PP  TP+R
Sbjct: 49  PHGPPPPPP--------PSPSPSPSPPAGKPTKPHPESTPPTKTPAR 87


>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 806 PTXFPXPIXPASXXTLNXPHXSPPQXTPSRXXVXPSTPP 922
           PT  P P+ PA+  + + P+ +P   TP+     P++PP
Sbjct: 29  PTTSPLPLAPAAAASSSNPNATPADTTPTSP--PPASPP 65


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +1

Query: 796 PPTTYXLPXPHXPXFRXDPQXTSXEPPSTNPFXXXGSPLYPPP 924
           PP     P PH P F   P     + P   P      P  PPP
Sbjct: 56  PPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPP 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,260,904
Number of Sequences: 37544
Number of extensions: 233280
Number of successful extensions: 695
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)