Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_M05
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.007
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 30 2.6
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 30 2.6
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 28 7.8
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 7.8
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 7.8
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 151 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 321
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 322 CVPESEC 342
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 193 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 342
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +1
Query: 97 LYLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 273
L FV+A+V + + C GE C M P+ ++ + P P
Sbjct: 7 LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63
Query: 274 QCFCDRPNVRNTKTGKCVPESEC**NCVN 360
+C C NVRN TG +P NCV+
Sbjct: 64 KCVCTEGNVRNIITGPSLPALFKPYNCVS 92
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 623 IAFILCFRFRGRCGKVFSALM 685
I FI+C F G G++FS LM
Sbjct: 225 IPFIICMEFMGNSGRIFSGLM 245
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 623 IAFILCFRFRGRCGKVFSALM 685
I FI+C F G G++FS LM
Sbjct: 208 IPFIICMEFMGNSGRIFSGLM 228
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 623 IAFILCFRFRGRCGKVFSALM 685
I FI+C F G G++FS LM
Sbjct: 208 IPFIICMEFMGNSGRIFSGLM 228
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 598 CNKQVXNNNCIHFMFQVQGEVW-EGFFCINESAXARGEAVCVLGALP 735
C+KQ + +++ EGF C+N++ R CVL +P
Sbjct: 96 CSKQKLTKYASELVIYAGEKIYGEGFGCVNQNDMVRFYTACVLSEVP 142
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 178 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 348
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 349 NCVN 360
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 178 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 348
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 349 NCVN 360
+CVN
Sbjct: 217 DCVN 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,775,402
Number of Sequences: 27780
Number of extensions: 325261
Number of successful extensions: 761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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