Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_M04
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...   159   5e-39
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...   159   5e-39
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...   132   6e-31
AY061302-1|AAL28850.1|  814|Drosophila melanogaster LD21614p pro...    29   8.5  
AE014296-96|AAF47383.2|  814|Drosophila melanogaster CG6905-PA p...    29   8.5  

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score =  159 bits (386), Expect = 5e-39
 Identities = 76/131 (58%), Positives = 98/131 (74%)
 Frame = +3

Query: 204 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNXKVKIVRTYKIEKRV 383
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+ K K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 384 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 563
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD    P
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115

Query: 564 SSNVIFKCRTC 596
           + N I KCR C
Sbjct: 116 TKN-IAKCRIC 125


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score =  159 bits (386), Expect = 5e-39
 Identities = 76/131 (58%), Positives = 98/131 (74%)
 Frame = +3

Query: 204 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNXKVKIVRTYKIEKRV 383
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+ K K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 384 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 563
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD    P
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115

Query: 564 SSNVIFKCRTC 596
           + N I KCR C
Sbjct: 116 TKN-IAKCRIC 125


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 222 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNXKVKIVRTYKIEKRVVSKSI 398
           F  SWADEV+ D    LPP +E ++   K VTEYK+++D  KVK+VRT+KIEK++V K++
Sbjct: 4   FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63

Query: 399 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVI 578
           A+R+ W KFGDS SDKPGPN  TT  +E++FMQFI SK+  Q   + +LD    P  N I
Sbjct: 64  ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLD----PGKN-I 117

Query: 579 FKCRTC 596
            KCR C
Sbjct: 118 AKCRIC 123


>AY061302-1|AAL28850.1|  814|Drosophila melanogaster LD21614p
           protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 18/76 (23%), Positives = 31/76 (40%)
 Frame = -1

Query: 316 SVTIFSPFSTTSEGGGSTPWSISTSSAQEA*NSSATGMSKHIFYTPIAILQFIV*SDN** 137
           +  I +PF T  EGG +TP    T S+         G +  +  TP  +   +  +    
Sbjct: 399 NTVIATPFRTQREGGAATPGGFQTPSSGALVPVKGAGGATGVVNTPAYVRDKLSINPEES 458

Query: 136 VGLIECSTCFAGYNKK 89
           +G+ E    +  Y K+
Sbjct: 459 MGVTETPAHYKNYQKQ 474


>AE014296-96|AAF47383.2|  814|Drosophila melanogaster CG6905-PA
           protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 18/76 (23%), Positives = 31/76 (40%)
 Frame = -1

Query: 316 SVTIFSPFSTTSEGGGSTPWSISTSSAQEA*NSSATGMSKHIFYTPIAILQFIV*SDN** 137
           +  I +PF T  EGG +TP    T S+         G +  +  TP  +   +  +    
Sbjct: 399 NTVIATPFRTQREGGAATPGGFQTPSSGALVPVKGAGGATGVVNTPAYVRDKLSINPEES 458

Query: 136 VGLIECSTCFAGYNKK 89
           +G+ E    +  Y K+
Sbjct: 459 MGVTETPAHYKNYQKQ 474


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,548,618
Number of Sequences: 53049
Number of extensions: 649354
Number of successful extensions: 2167
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)