Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_M03
(890 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q96EH5 Cluster: 60S ribosomal protein L39-like; n=113; ... 91 3e-17
UniRef50_P51425 Cluster: 60S ribosomal protein L39; n=9; Poaceae... 90 8e-17
UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, wh... 78 3e-13
UniRef50_Q4N5K7 Cluster: 60S ribosomal protein L39, putative; n=... 77 5e-13
UniRef50_A0DH83 Cluster: Chromosome undetermined scaffold_50, wh... 74 4e-12
UniRef50_A0BVU9 Cluster: Chromosome undetermined scaffold_130, w... 74 4e-12
UniRef50_UPI0001509BE0 Cluster: hypothetical protein TTHERM_0052... 71 4e-11
UniRef50_UPI00006CB3D9 Cluster: Ribosomal L39 protein; n=1; Tetr... 69 2e-10
UniRef50_UPI0000D99F63 Cluster: PREDICTED: similar to 60S riboso... 60 6e-08
UniRef50_Q4RTC8 Cluster: Chromosome 1 SCAF14998, whole genome sh... 60 7e-08
UniRef50_Q8SQP8 Cluster: 60S ribosomal protein L39; n=1; Encepha... 55 3e-06
UniRef50_A1CZG2 Cluster: Ribosomal protein L39, putative; n=1; N... 54 5e-06
UniRef50_P13005 Cluster: 50S ribosomal protein L39e; n=10; Archa... 54 6e-06
UniRef50_UPI00015BAD96 Cluster: LSU ribosomal protein L39E; n=1;... 47 7e-04
UniRef50_P54056 Cluster: 50S ribosomal protein L39e; n=19; Archa... 46 0.001
UniRef50_Q16VX1 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_A7D3F5 Cluster: Ribosomal protein L39e; n=1; Halorubrum... 43 0.012
UniRef50_A0RW53 Cluster: Ribosomal protein L39; n=2; Thermoprote... 42 0.028
UniRef50_Q8PYQ5 Cluster: 50S ribosomal protein L39e; n=19; Archa... 39 0.20
UniRef50_Q179Y7 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
UniRef50_UPI0000F31DEE Cluster: UPI0000F31DEE related cluster; n... 34 4.2
UniRef50_Q01CG7 Cluster: Chromosome 03 contig 1, DNA sequence; n... 34 4.2
UniRef50_Q4A2U1 Cluster: Putative membrane protein precursor; n=... 34 5.6
UniRef50_Q948Y7 Cluster: VMP3 protein; n=1; Volvox carteri f. na... 34 5.6
UniRef50_Q5QQM4 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificit... 34 5.6
UniRef50_Q01942 Cluster: Extensin; n=22; root|Rep: Extensin - So... 33 7.4
UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;... 33 9.8
UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8; ... 33 9.8
UniRef50_A3QX14 Cluster: Wiskott-Aldrich syndrome protein; n=1; ... 33 9.8
>UniRef50_Q96EH5 Cluster: 60S ribosomal protein L39-like; n=113;
Eukaryota|Rep: 60S ribosomal protein L39-like - Homo
sapiens (Human)
Length = 51
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>UniRef50_P51425 Cluster: 60S ribosomal protein L39; n=9;
Poaceae|Rep: 60S ribosomal protein L39 - Zea mays
(Maize)
Length = 51
Score = 89.8 bits (213), Expect = 8e-17
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKL 221
M +HKTF IK+ LAKK++QNRPIP W+RMR NTIRYNAKRRHWRRTKL
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 131
Score = 78.2 bits (184), Expect = 3e-13
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +3
Query: 72 KMSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
KM AHK+ +K+ L K KQNRP+P W R R NTIRYN+KRRHWRRTKL +
Sbjct: 79 KMGAHKSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 130
>UniRef50_Q4N5K7 Cluster: 60S ribosomal protein L39, putative; n=1;
Theileria parva|Rep: 60S ribosomal protein L39, putative
- Theileria parva
Length = 79
Score = 77.4 bits (182), Expect = 5e-13
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3
Query: 87 KTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
+T +K+ L KK+KQNRPIP W R++ GN IRYNAKRR+WRRTKLK+
Sbjct: 33 RTLTLKKHLGKKMKQNRPIPHWFRLKTGNKIRYNAKRRYWRRTKLKV 79
>UniRef50_A0DH83 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_50,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 93
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = +3
Query: 81 AHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
AHK+ +K+ L K KQNRP+P W R R NTIRYN+KRRHWRRTKL +
Sbjct: 44 AHKSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 92
>UniRef50_A0BVU9 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 137
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = +3
Query: 81 AHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
AHK+ +K+ L K KQNRP+P W R R NTIRYN+KRRHWRRTKL +
Sbjct: 88 AHKSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 136
>UniRef50_UPI0001509BE0 Cluster: hypothetical protein
TTHERM_00526400; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00526400 - Tetrahymena
thermophila SB210
Length = 121
Score = 70.9 bits (166), Expect = 4e-11
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3
Query: 72 KMSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
+M A+KT +K+ +K+KQNRP+P W R + IRYN+KRR+WRRTKLK+
Sbjct: 69 EMGANKTLNMKKRFGRKIKQNRPLPNWYRYKSDTNIRYNSKRRNWRRTKLKI 120
>UniRef50_UPI00006CB3D9 Cluster: Ribosomal L39 protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L39 protein
- Tetrahymena thermophila SB210
Length = 89
Score = 68.5 bits (160), Expect = 2e-10
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +3
Query: 81 AHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
A+KT +K+ +K+KQNRP+P W R + IRYN+KRR+WRRTKLK+
Sbjct: 40 ANKTLNMKKRFGRKIKQNRPLPNWYRYKSDTNIRYNSKRRNWRRTKLKI 88
>UniRef50_UPI0000D99F63 Cluster: PREDICTED: similar to 60S ribosomal
protein L39; n=2; Catarrhini|Rep: PREDICTED: similar to
60S ribosomal protein L39 - Macaca mulatta
Length = 102
Score = 60.5 bits (140), Expect = 6e-08
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAK 194
MS+ KTF IK+ LA+K KQNRPIPQW++M+ G+ IRYN+K
Sbjct: 1 MSSLKTFKIKQFLAQKQKQNRPIPQWIQMKTGDKIRYNSK 40
>UniRef50_Q4RTC8 Cluster: Chromosome 1 SCAF14998, whole genome
shotgun sequence; n=6; Fungi/Metazoa group|Rep:
Chromosome 1 SCAF14998, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 503
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 78 SAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTI 179
S+HKTF IKR LAKK KQNRPIPQW+RM+ GN I
Sbjct: 429 SSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKI 462
>UniRef50_Q8SQP8 Cluster: 60S ribosomal protein L39; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L39
- Encephalitozoon cuniculi
Length = 52
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
M + KT ++K L + LK+NR IP W RM + YN RRHWR KLK+
Sbjct: 1 MGSRKTALVKTRLMRALKRNREIPAWKRMMKEHKGEYNRARRHWRSKKLKI 51
>UniRef50_A1CZG2 Cluster: Ribosomal protein L39, putative; n=1;
Neosartorya fischeri NRRL 181|Rep: Ribosomal protein
L39, putative - Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain
ATCC 1020 / DSM 3700 / NRRL 181))
Length = 69
Score = 54.0 bits (124), Expect = 5e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 81 AHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIR 182
+HK+F K+ LAK +QNRPIPQW+R+R GNTIR
Sbjct: 36 SHKSFRTKQKLAKAQRQNRPIPQWIRLRTGNTIR 69
>UniRef50_P13005 Cluster: 50S ribosomal protein L39e; n=10;
Archaea|Rep: 50S ribosomal protein L39e - Sulfolobus
acidocaldarius
Length = 51
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS HK+ K L K LK+N PIP WV ++ IR+N RR+WRR LK+
Sbjct: 1 MSKHKSLGKKLRLGKALKRNSPIPAWVIIKTQAEIRFNPLRRNWRRNNLKV 51
>UniRef50_UPI00015BAD96 Cluster: LSU ribosomal protein L39E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L39E - Ignicoccus hospitalis KIN4/I
Length = 55
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 81 AHKTFIIKRX-LAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLK 224
AH + K+ L KK KQNR +P WV ++ + N RR+WRR K+K
Sbjct: 5 AHYKHVAKKIRLGKKTKQNRALPAWVILKTRRRVTRNPMRRYWRRQKIK 53
>UniRef50_P54056 Cluster: 50S ribosomal protein L39e; n=19;
Archaea|Rep: 50S ribosomal protein L39e - Methanococcus
jannaschii
Length = 51
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLK 224
M ++K K LAK LKQNR +P +V ++ +R++ K R+WRR KLK
Sbjct: 1 MGSNKPLGKKVRLAKALKQNRRVPLFVIVKTRGRVRFHPKMRYWRRKKLK 50
>UniRef50_Q16VX1 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = +2
Query: 59 NLIVQNVGP*DVYY*AXIGQKAETKQTHSSVGKDAXRKHYSI*R*EASLEKDXAQVVS 232
N ++VGP D A QKAE KQTHS+V ++A KHY + R SLE A+ VS
Sbjct: 95 NTFDRDVGPQDFPDQAEACQKAEAKQTHSTVDQNAHWKHYPLQRQAPSLETYEAEAVS 152
>UniRef50_A7D3F5 Cluster: Ribosomal protein L39e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L39e -
Halorubrum lacusprofundi ATCC 49239
Length = 64
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 102 KRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKL 221
K+ LAK +QN +P WV M+ + N KRR+WRR L
Sbjct: 23 KKRLAKAERQNTRVPAWVMMKTDMNVTRNPKRRNWRRNDL 62
>UniRef50_A0RW53 Cluster: Ribosomal protein L39; n=2;
Thermoprotei|Rep: Ribosomal protein L39 - Cenarchaeum
symbiosum
Length = 52
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
M + K K L KK KQ P+P W+ ++ +R N KRR WR T +++
Sbjct: 1 MGSRKPSGRKIRLQKKTKQAAPVPAWIILKTRRGVRTNPKRRAWRSTDVEV 51
>UniRef50_Q8PYQ5 Cluster: 50S ribosomal protein L39e; n=19;
Archaea|Rep: 50S ribosomal protein L39e - Methanosarcina
mazei (Methanosarcina frisia)
Length = 51
Score = 38.7 bits (86), Expect = 0.20
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 102 KRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKL 221
K+ LAK KQN +P W ++ + + +RRHWRR L
Sbjct: 9 KKRLAKAHKQNSRVPVWAIVKTNRKVVSHPRRRHWRRGSL 48
>UniRef50_Q179Y7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 975
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXP-XGPPKGPXTXXNGPPLPXXFXXXXPXP 850
P PPG PF P GP +GP GPP P P P
Sbjct: 441 PGGPGAPPPGGPPFGPMGGPGRGPEMPSGGPPGPMGAMPIHPPP 484
>UniRef50_UPI0000F31DEE Cluster: UPI0000F31DEE related cluster; n=1;
Bos taurus|Rep: UPI0000F31DEE UniRef100 entry - Bos
Taurus
Length = 462
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P PP P P GPPKGP T P +P F P P P P
Sbjct: 3 PLLPPPPPPPPPPTAPQGPPKGPPTT---PVVPAPFVPIPPLPLSALPPGPLP 52
>UniRef50_Q01CG7 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 567
Score = 34.3 bits (75), Expect = 4.2
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 183 YNAKRRHWRRTKL 221
YNAKRRHWRRTKL
Sbjct: 4 YNAKRRHWRRTKL 16
>UniRef50_Q4A2U1 Cluster: Putative membrane protein precursor; n=1;
Emiliania huxleyi virus 86|Rep: Putative membrane protein
precursor - Emiliania huxleyi virus 86
Length = 2873
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P SPP P P PP P PP P P PP P SP
Sbjct: 2715 PSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPLPPAPSP 2767
Score = 33.1 bits (72), Expect = 9.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P SPP P P PP P PP P P PP P + P
Sbjct: 2720 PSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPLPPAPSPPPSPP 2772
Score = 33.1 bits (72), Expect = 9.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P SPP P P PP P PP P P PP P + P
Sbjct: 2725 PSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPLPPAPSPPPSPPPPSPP 2777
>UniRef50_Q948Y7 Cluster: VMP3 protein; n=1; Volvox carteri f.
nagariensis|Rep: VMP3 protein - Volvox carteri f.
nagariensis
Length = 687
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P SPP P P PP P PP P P PP P SP
Sbjct: 590 PSAPPPSPPPPSPPPPNPPPPSPPPPNPPPPSPPPPSPPPPSPPPPNPPPPSP 642
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P SPP P P PP P PP P P PP P SP
Sbjct: 595 PSPPPPSPPPPNPPPPSPPPPNPPPPSPPPPSPPPPSPPPPNPPPPSPPPPSP 647
>UniRef50_Q5QQM4 Cluster: Putative uncharacterized protein; n=1;
Orpinomyces sp. OUS1|Rep: Putative uncharacterized
protein - Orpinomyces sp. OUS1
Length = 259
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXG-PPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P PPG P P G PP GP GPP P PP +P
Sbjct: 39 PGASPMGPPGAPPMGPPGAPPMGPPGAPMGPPGTPMGGPARPPPPQLQRSATAP 92
>UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificity
factor subunit 6; n=26; Euteleostomi|Rep: Cleavage and
polyadenylation specificity factor subunit 6 - Homo
sapiens (Human)
Length = 551
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 PPGXXPFXPX-GPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP GPP P P PP P P
Sbjct: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPP-----PGPFPPRPPGPLGPP 334
>UniRef50_Q01942 Cluster: Extensin; n=22; root|Rep: Extensin -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 132
Score = 33.5 bits (73), Expect = 7.4
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PXXXXXSPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
P SPP P P P P + PP P F P PP SP
Sbjct: 72 PPYYYKSPPPPSPSPPPPSPSPPPPTYSSPPPPPPFYENIPLPPVIGVSYASP 124
>UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;
Volvox carteri f. nagariensis|Rep: Pherophorin-dz1
protein precursor - Volvox carteri f. nagariensis
Length = 1009
Score = 33.1 bits (72), Expect = 9.8
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
SPP P P PP P PP P P PP P P
Sbjct: 213 SPPPPPPLPPSPPPPSPPPPPPSPPPPLPPPPPPPPPPPPPPPPPPP 259
>UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8;
Chlamydomonadales|Rep: Pherophorin-C2 protein precursor
- Chlamydomonas reinhardtii
Length = 853
Score = 33.1 bits (72), Expect = 9.8
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
SPP P P PP P PP P P PP P SP
Sbjct: 191 SPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSP 237
>UniRef50_A3QX14 Cluster: Wiskott-Aldrich syndrome protein; n=1;
Suberites domuncula|Rep: Wiskott-Aldrich syndrome
protein - Suberites domuncula (Sponge)
Length = 410
Score = 33.1 bits (72), Expect = 9.8
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNS 877
+PP P PP P GPP P P PP P +S
Sbjct: 310 APPPPPPVGVPAPPPPPPVGGTGPPKPPSAAGGPPPPPSRDKPSSS 355
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,750,080
Number of Sequences: 1657284
Number of extensions: 6340846
Number of successful extensions: 19313
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17331
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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