Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_M03
(890 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57846-1|AAB02265.1| 51|Homo sapiens ribosomal protein L39 pro... 94 7e-19
D79205-1|BAA11465.1| 51|Homo sapiens ribosomal protein L39 pro... 94 7e-19
BC070205-1|AAH70205.1| 51|Homo sapiens ribosomal protein L39 p... 94 7e-19
BC001019-1|AAH01019.1| 51|Homo sapiens ribosomal protein L39 p... 94 7e-19
AB061835-1|BAB79473.1| 51|Homo sapiens ribosomal protein L39 p... 94 7e-19
L05096-1|AAC15859.1| 51|Homo sapiens ribosomal protein L39 pro... 91 5e-18
BC012328-1|AAH12328.1| 51|Homo sapiens ribosomal protein L39-l... 91 5e-18
AF548529-1|AAN52397.1| 51|Homo sapiens ribosomal protein L39-2... 91 5e-18
AB209077-1|BAD92314.1| 70|Homo sapiens ribosomal protein L39 v... 91 5e-18
AB063610-1|BAC19837.1| 51|Homo sapiens ribosomal protein L39-l... 91 5e-18
AB063607-1|BAC19834.1| 29|Homo sapiens ribosomal protein L39-l... 55 4e-07
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 0.80
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 0.80
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 34 0.80
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 34 0.80
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 0.80
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 4.2
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 4.2
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 4.2
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 4.2
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 4.2
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 4.2
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 31 4.2
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 4.2
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 4.2
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 4.2
BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog (Drosop... 31 7.4
BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein. 31 7.4
AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein. 31 7.4
AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog (Drosop... 31 7.4
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 31 7.4
AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog (Drosop... 31 7.4
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 31 7.4
AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens ... 31 7.4
AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein. 31 7.4
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 30 9.8
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 30 9.8
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 30 9.8
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 30 9.8
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 30 9.8
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 30 9.8
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 30 9.8
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 30 9.8
>U57846-1|AAB02265.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 93.9 bits (223), Expect = 7e-19
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW+RM+ GN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>D79205-1|BAA11465.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 93.9 bits (223), Expect = 7e-19
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW+RM+ GN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>BC070205-1|AAH70205.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 93.9 bits (223), Expect = 7e-19
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW+RM+ GN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>BC001019-1|AAH01019.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 93.9 bits (223), Expect = 7e-19
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW+RM+ GN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>AB061835-1|BAB79473.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 93.9 bits (223), Expect = 7e-19
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW+RM+ GN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>L05096-1|AAC15859.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 91.1 bits (216), Expect = 5e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>BC012328-1|AAH12328.1| 51|Homo sapiens ribosomal protein L39-like
protein.
Length = 51
Score = 91.1 bits (216), Expect = 5e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>AF548529-1|AAN52397.1| 51|Homo sapiens ribosomal protein L39-2
protein.
Length = 51
Score = 91.1 bits (216), Expect = 5e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>AB209077-1|BAD92314.1| 70|Homo sapiens ribosomal protein L39
variant protein.
Length = 70
Score = 91.1 bits (216), Expect = 5e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IK+ LAKK KQNRPIPQW+RM+ GN IRYN+KRRHW+RTKL L
Sbjct: 20 MSSHKTFKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLGL 70
>AB063610-1|BAC19837.1| 51|Homo sapiens ribosomal protein L39-like
protein.
Length = 51
Score = 91.1 bits (216), Expect = 5e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRMRXGNTIRYNAKRRHWRRTKLKL 227
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>AB063607-1|BAC19834.1| 29|Homo sapiens ribosomal protein L39-like
protein.
Length = 29
Score = 54.8 bits (126), Expect = 4e-07
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +3
Query: 75 MSAHKTFIIKRXLAKKLKQNRPIPQWVRM 161
MS+HKTF IKR LAKK KQNRPIPQW++M
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQM 29
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.80
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 PPGXXPFXPX-GPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP GPP P P PP P P
Sbjct: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPP-----PGPFPPRPPGPLGPP 334
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.80
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 PPGXXPFXPX-GPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP GPP P P PP P P
Sbjct: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPP-----PGPFPPRPPGPLGPP 334
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.80
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 PPGXXPFXPX-GPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP GPP P P PP P P
Sbjct: 220 PPGPPPPVPGYGPPPGPPPPQQGPPPP-----PGPFPPRPPGPLGPP 261
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.80
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 PPGXXPFXPX-GPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP GPP P P PP P P
Sbjct: 330 PPGPPPPVPGYGPPPGPPPPQQGPPPP-----PGPFPPRPPGPLGPP 371
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.80
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 PPGXXPFXPX-GPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP GPP P P PP P P
Sbjct: 293 PPGPPPPVPGYGPPPGPPPPQQGPPPP-----PGPFPPRPPGPLGPP 334
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
+PP P PP P +GPP P P PP P +P
Sbjct: 276 APPPPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAP 322
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
+PP P PP P +GPP P P PP P +P
Sbjct: 276 APPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP P P P P P P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 504
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP P P P P P P
Sbjct: 218 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 263
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP P P P P P P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 504
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
+PP P PP P +GPP P P PP P +P
Sbjct: 276 APPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 867 GXXXXGGXGXXXXKXXGXGGPXXXVXGPFGGPXGXKGXXPGG 742
G G G G GGP GP GGP G G PGG
Sbjct: 133 GAGAAAGGGGAHDGPGGGGGPGGG-GGPGGGPGGGGGGGPGG 173
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP P P P P P P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 504
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 740 SPPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
+PP P PP P +GPP P P PP P +P
Sbjct: 276 APPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXPXNSP 880
PPG P P GPP GP P P P P P P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 504
>BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 591
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 333 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
>BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein.
Length = 527
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 290 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 330
>AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein.
Length = 570
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 333 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
>AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 333 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 580 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 620
>AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 333 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 580 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 620
>AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ38927 fis, clone NT2NE2012505, highly similar to
Gallus gallus mRNA for avena. ).
Length = 467
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 230 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 270
>AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein.
Length = 591
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 743 PPGXXPFXPXGPPKGPXTXXNGPPLPXXFXXXXPXPPXXXXP 868
PPG P P P GP PPLP P PP P
Sbjct: 333 PPGPPPPPPL-PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 254 GMGGPNMPPPGPSGVPPGMPGQPPGG 279
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXGGPXXXVXGPFGGPXGXKGXXPGG 742
G GGP GP G P G G PGG
Sbjct: 211 GMGGPNMPPPGPSGVPPGMPGQPPGG 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,301,462
Number of Sequences: 237096
Number of extensions: 1160592
Number of successful extensions: 3737
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3495
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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