Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L24
         (910 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15; Coeloma...   166   8e-40
UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19; Eumetazo...   159   1e-37
UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4; Magnoli...    62   2e-08
UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole gen...    57   5e-07
UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1; ...    49   1e-04
UniRef50_UPI00006CB667 Cluster: hypothetical protein TTHERM_0044...    46   0.002
UniRef50_Q553E6 Cluster: Putative uncharacterized protein; n=2; ...    40   0.12 

>UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15;
           Coelomata|Rep: UPF0139 protein C19orf56 - Homo sapiens
           (Human)
          Length = 106

 Score =  166 bits (403), Expect = 8e-40
 Identities = 74/100 (74%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
 Frame = +3

Query: 228 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSI 404
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW AV+CS I
Sbjct: 7   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFI 66

Query: 405 SFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 524
           SFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 67  SFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106


>UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19;
           Eumetazoa|Rep: UPF0139 protein CG10674 - Drosophila
           melanogaster (Fruit fly)
          Length = 108

 Score =  159 bits (385), Expect = 1e-37
 Identities = 71/108 (65%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
 Frame = +3

Query: 216 MQLSADPRRADRERRYKPPP---PTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTA 386
           M ++ DPRR ++  RYK P     +    ED+  DYMNILGM+FSMCGLMM+LKWCAW A
Sbjct: 1   MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFA 60

Query: 387 VFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPWAA 530
           ++CS ISFA+SR SDD KQ++SSFMLS+SAVVMSYLQNPA MTPPWA+
Sbjct: 61  LYCSCISFASSRASDDAKQVLSSFMLSVSAVVMSYLQNPAAMTPPWAS 108


>UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4;
           Magnoliophyta|Rep: UPF0139 protein At5g07960 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 107

 Score = 62.1 bits (144), Expect = 2e-08
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = +3

Query: 231 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 410
           DPR+    + Y P P   AP EDL  DY   + ++  + G+M R K C+W A+   + S 
Sbjct: 13  DPRQPSAAKPYIPRPV--AP-EDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSL 69

Query: 411 ANSR-VSDDTKQIVSSFMLSISAVVMSYLQNPAPMT 515
           AN R + +D KQI  + M +I  +V +YL    P T
Sbjct: 70  ANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPAT 105


>UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
           chr17 scaffold_12, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 109

 Score = 57.2 bits (132), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +3

Query: 231 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 410
           DPR+      Y  P       EDL  DY   + ++F++ GLM R K C+W A+   + S 
Sbjct: 13  DPRQPSTANPYVAP---MVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69

Query: 411 ANSR-VSDDTKQIVSSFMLSISAVVMSYL 494
           +N R   +D KQI  + M +I  ++ +YL
Sbjct: 70  SNMRNFENDLKQISMAMMFAIMGLMTNYL 98


>UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 116

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 231 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 410
           DPR+      Y  P       EDL  DY   + ++F++ GLM R K C+W A+   + S 
Sbjct: 13  DPRQPSTANPYVAP---MVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69

Query: 411 ANSR-VSDDTKQI 446
           +N R   +D KQI
Sbjct: 70  SNMRNFENDLKQI 82


>UniRef50_UPI00006CB667 Cluster: hypothetical protein
           TTHERM_00446120; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00446120 - Tetrahymena
           thermophila SB210
          Length = 121

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +3

Query: 222 LSADPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSS 401
           +S   RR++ +  Y  P P +   +    D   IL  +    G+MM++  C W A+F   
Sbjct: 1   MSTRDRRSEEKIIYYQPAPQTEDQQG--GDLQQILSFILGFVGIMMKI--CLWVALFMLL 56

Query: 402 ISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNP 503
            +FAN + + D KQ++ +  + +  +V  Y   P
Sbjct: 57  SNFANIKQTSDVKQMIINAGIIVMGMVSLYYWQP 90


>UniRef50_Q553E6 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 98

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +3

Query: 228 ADPRRADR-ERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSI 404
           +DPR+      R++    T     +L  +  ++  ++F   G+M++ K C W +  C   
Sbjct: 2   SDPRKESLIVERFEMRASTEPKEGEL--ELYSLFSIIFGFLGIMLKYKICLWVSAVCCVA 59

Query: 405 SFANSRVSDDT-KQIVSSFMLSISAVVMSY 491
             +N +  D + + I+S   LS+  +VM+Y
Sbjct: 60  YLSNLKSKDSSVRTILSPVSLSLMGLVMAY 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,661,015
Number of Sequences: 1657284
Number of extensions: 10831869
Number of successful extensions: 34575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34470
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)