Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L22
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.3  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 451  DVTRSPPV*SDHTSDVDKQPCSIYYCHQKHDFG 353
            D  R  P  S    DV +     Y CH ++D+G
Sbjct: 1351 DKIRQQPDGSLFIRDVSRNNAGEYSCHVENDYG 1383


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 616 HQLSGVGIVHHDEERCYNN 560
           H+++   I H+D+ER ++N
Sbjct: 251 HEIAVHSITHNDDERFWSN 269


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/60 (21%), Positives = 29/60 (48%)
 Frame = +2

Query: 359 VVLLMTVINAAWLLVNIACVIGLHRRRPGNIKFYVLFASCRLVLVFAGLVYLTITVRTPV 538
           +VLL+  +    LL+ I  ++   +     + + V+F    +V  F+G ++L   +R  +
Sbjct: 215 LVLLLVALTTLQLLIYIQVIVIGTKNTIETVAYSVIFILWHIVGTFSG-IFLCDLIRREI 273


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 722 YYFYGHCTKXSVFYYYY 772
           Y++Y       V+Y+YY
Sbjct: 102 YFYYAFIILLCVYYFYY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,982
Number of Sequences: 336
Number of extensions: 3539
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)