Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L22
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1827|AAF50151.1|  196|Drosophila melanogaster CG14151-P...    32   0.90 
AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p pro...    31   2.1  
AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA...    31   2.1  
BT029572-1|ABL75631.1|  211|Drosophila melanogaster IP16890p pro...    29   8.4  

>AE014296-1827|AAF50151.1|  196|Drosophila melanogaster CG14151-PA
           protein.
          Length = 196

 Score = 32.3 bits (70), Expect = 0.90
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +2

Query: 350 GTEVVLLMTVINAAWLLVNIACVIGLHRRRPGNIKFYVLFASCRLVLVFAGLVY-LTITV 526
           G    L+  +    W+++ I  + G++RR+ G ++F+++F    ++L    L+Y LT+ +
Sbjct: 39  GHWTALVALIFTIFWMVIIIVLMAGIYRRKLGLVRFWLVFTCLGILLDGFILLYGLTLAI 98


>AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p
           protein.
          Length = 648

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -2

Query: 429 CSPITQAMLTSNHAAFITVIRSTTSVPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 262
           C P++ A  TS H  F+ +I    S     G + + R G+ L + P+    V + P
Sbjct: 30  CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85


>AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA
           protein.
          Length = 648

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -2

Query: 429 CSPITQAMLTSNHAAFITVIRSTTSVPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 262
           C P++ A  TS H  F+ +I    S     G + + R G+ L + P+    V + P
Sbjct: 30  CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85


>BT029572-1|ABL75631.1|  211|Drosophila melanogaster IP16890p
           protein.
          Length = 211

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 11/54 (20%), Positives = 28/54 (51%)
 Frame = +2

Query: 359 VVLLMTVINAAWLLVNIACVIGLHRRRPGNIKFYVLFASCRLVLVFAGLVYLTI 520
           + +   +    W+ + +  ++G+H R P  ++ +++F SC  ++V   LV   +
Sbjct: 46  LTIFAAIFGLFWITMIVMLLVGIHGRHPSCVRAWIIF-SCVGIMVEMCLVLYAV 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,112,759
Number of Sequences: 53049
Number of extensions: 655216
Number of successful extensions: 1341
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)