Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L22
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    32   0.47 
AF100307-14|AAC68927.1|  313|Caenorhabditis elegans Hypothetical...    30   1.9  
AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine re...    29   5.8  
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 476 CRLVLVFAGLVYLTITVRTPVLMLHRLDIVVASFFIMVYN-TYARQLVNEPQXNSSP 643
           C   L+ A ++ + I++ TP+ ++    +++  +F+M+Y    +RQL      N SP
Sbjct: 702 CTQTLLNACMILVLISISTPIFLVCAAPLILIYYFVMIYYIPTSRQLKRLESANRSP 758


>AF100307-14|AAC68927.1|  313|Caenorhabditis elegans Hypothetical
           protein T12B5.1 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 92  DSYDVWRREWLPRYCKNLKGF 30
           D +D+W  E+L  YC N+K F
Sbjct: 291 DKFDIWLEEYLYNYCLNVKRF 311


>AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 66 protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = +2

Query: 503 LVYLTI---TVRTPVLMLHRLDIVVASFFIMVYNTYARQL 613
           LV+ TI    +R  +++L  LD VVASFF + Y+ + R++
Sbjct: 84  LVWPTIPLGAIRATLVLLITLDRVVASFFPIFYHNHRRRI 123


>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 98   RTDSYDVWRREWLPRYCK 45
            RTD   VW+ EW   YCK
Sbjct: 3113 RTDMMGVWQTEWGSEYCK 3130


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 98   RTDSYDVWRREWLPRYCK 45
            RTD   VW+ EW   YCK
Sbjct: 3140 RTDMMGVWQTEWGSEYCK 3157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,002,151
Number of Sequences: 27780
Number of extensions: 334308
Number of successful extensions: 787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)