Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L20
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0259 - 1996427-1998772                                           31   1.2  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   3.5  
06_01_0655 + 4742267-4742531,4743313-4744136                           29   6.2  
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830...    29   6.2  

>03_01_0259 - 1996427-1998772
          Length = 781

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 399 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 503
           I  ++ V++ N   HHALKLI + +  +I  GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 467 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 381
           +V    GVM P + +L  LLGE+++KL G
Sbjct: 7   IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35


>06_01_0655 + 4742267-4742531,4743313-4744136
          Length = 362

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 183 PPVRHQCLVQVWREKPAQHTARTKANKGRRRL 88
           PP R      +W EK  +   + K NKG RRL
Sbjct: 12  PPPRRVTAGDLWLEKTKKQQQQKKKNKGARRL 43


>04_03_0694 +
           18781776-18781994,18782475-18782648,18782743-18783057,
           18783791-18785569,18786334-18786651,18787052-18787105
          Length = 952

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 186 QLYMXVVI---GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 356
           +LY+ +++   G Y+ A+   S     + G  +KE  K L+E+    T++   +L T  G
Sbjct: 491 ELYLKILLEDLGRYDEALQYISSLEANQAGLTVKEYGKILVEHRPAETVEILLRLCTDGG 550

Query: 357 KEIVK 371
             + +
Sbjct: 551 DPMTR 555


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,317
Number of Sequences: 37544
Number of extensions: 337682
Number of successful extensions: 1071
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)