Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L20
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.7  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   5.1  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 419 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLESLPPCWKT 556
           Q  +Q+   + Q  +  + QQ C +  Q+Q QQ+ L +     W T
Sbjct: 192 QQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTT 237


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 417 VKLINKR-DHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKVYPRVG 551
           VK+  K+ D  A   I+ +N   I  G  K   S K+ W   P++G
Sbjct: 681 VKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKPKIG 726


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 142 LTPHLHQALMXYWRSSCIXVSSLVNTRPLSPN 237
           L P  HQ  M  WR     +      RP +P+
Sbjct: 100 LAPMSHQETMTLWREVAAALDGKAKCRPRTPS 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,051
Number of Sequences: 2352
Number of extensions: 12949
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)