Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L20
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069106-1|AAL39251.1|  763|Drosophila melanogaster GH12404p pro...    32   0.86 
AE014297-449|AAF54130.2|  763|Drosophila melanogaster CG33097-PA...    32   0.86 

>AY069106-1|AAL39251.1|  763|Drosophila melanogaster GH12404p
           protein.
          Length = 763

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
 Frame = +3

Query: 219 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWT-KDGKEIVKSYFPIQFR 395
           E  + +  E L+EK         K L     +   D  Y L T K+ K++ + Y   +  
Sbjct: 585 EMRVTQFKEMLREKDVSAFSTWEKEL----HKIVFDPRYLLLTSKERKQVFEKYVKDRAE 640

Query: 396 VIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKVYPRVGKQQSLLQD 575
               E+  K+  KR+     + + + H K +F +   + +K   ++   +V +++SL  +
Sbjct: 641 EERKEKRNKMRQKREDFRSLMEEARLHGKSSFSEFSQRNAKDERYRAIEKVRERESLFNE 700

Query: 576 HV 581
           ++
Sbjct: 701 YI 702


>AE014297-449|AAF54130.2|  763|Drosophila melanogaster CG33097-PA,
           isoform A protein.
          Length = 763

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
 Frame = +3

Query: 219 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWT-KDGKEIVKSYFPIQFR 395
           E  + +  E L+EK         K L     +   D  Y L T K+ K++ + Y   +  
Sbjct: 585 EMRVTQFKEMLREKDVSAFSTWEKEL----HKIVFDPRYLLLTSKERKQVFEKYVKDRAE 640

Query: 396 VIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKVYPRVGKQQSLLQD 575
               E+  K+  KR+     + + + H K +F +   + +K   ++   +V +++SL  +
Sbjct: 641 EERKEKRNKMRQKREDFRSLMEEARLHGKSSFSEFSQRNAKDERYRAIEKVRERESLFNE 700

Query: 576 HV 581
           ++
Sbjct: 701 YI 702


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,680,048
Number of Sequences: 53049
Number of extensions: 558002
Number of successful extensions: 2265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2265
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)