Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_L20
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 31 0.78
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.3
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 28 7.3
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 7.3
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 28 7.3
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 28 7.3
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 28 7.3
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 9.6
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 9.6
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 9.6
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 9.6
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 9.6
AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical ... 28 9.6
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 9.6
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 189 LYMXVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 302
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 243 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 413
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 414 TVKLINKRDHHALKLI 461
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 150 TLAPSTDXVLAEQL-YMXVVIGEYETAIAKCSEYLKEKKGEVIK 278
TL+ + E++ Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 255 TLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVK 298
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 267 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 356
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 150 TLAPSTDXVLAEQL-YMXVVIGEYETAIAKCSEYLKEKKGEVIK 278
TL+ + E++ Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 256 TLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVK 299
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 183 EQLYMXVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 362
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 363 IV--KSYFPIQFRVI 401
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 429 NKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKVYPRVGKQQSLLQDH 578
+KR H A I + + +FGD +++ + + VG Q+ LQDH
Sbjct: 292 SKRSHEAAARIRAPSPPRRSFGDRGNRSDEHHGGSRHMDVGPQRRRLQDH 341
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 429 NKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKVYPRVGKQQSLLQDH 578
+KR H A I + + +FGD +++ + + VG Q+ LQDH
Sbjct: 427 SKRSHEAAARIRAPSPPRRSFGDRGNRSDEHHGGSRHMDVGPQRRRLQDH 476
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 429 NKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKVYPRVGKQQSLLQDH 578
+KR H A I + + +FGD +++ + + VG Q+ LQDH
Sbjct: 472 SKRSHEAAARIRAPSPPRRSFGDRGNRSDEHHGGSRHMDVGPQRRRLQDH 521
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 207 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 386
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3825 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3879
Query: 387 QFRVIFTEQTVKLINKRDHHA 449
T ++ + + HA
Sbjct: 3880 LITTTPTNSSLHIGRLENSHA 3900
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 207 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 386
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3778 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3832
Query: 387 QFRVIFTEQTVKLINKRDHHA 449
T ++ + + HA
Sbjct: 3833 LITTTPTNSSLHIGRLENSHA 3853
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 207 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 386
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 387 QFRVIFTEQTVKLINKRDHHA 449
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 207 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 386
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 387 QFRVIFTEQTVKLINKRDHHA 449
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 207 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 386
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4022 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4076
Query: 387 QFRVIFTEQTVKLINKRDHHA 449
T ++ + + HA
Sbjct: 4077 LITTTPTNSSLHIGRLENSHA 4097
>AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical
protein Y40C7B.3 protein.
Length = 416
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +3
Query: 312 RNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAF 491
++ M + +TK+ K + P+ F E K+I R H+ +N N I
Sbjct: 139 KDIMTYKINKYTKNRKGNITFCIPLTHIFGFVECYNKIIYGRKHNLSLYRSPENKNSIIS 198
Query: 492 GDSKDKTSK----KVSW---KVYPRVGKQQSLL 569
D + T+K K+ W K+ P + Q LL
Sbjct: 199 SDPQRFTAKMVINKLQWIIPKIIPCLEMQNKLL 231
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 207 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 386
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3794 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3848
Query: 387 QFRVIFTEQTVKLINKRDHHA 449
T ++ + + HA
Sbjct: 3849 LITTTPTNSSLHIGRLENSHA 3869
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,076,276
Number of Sequences: 27780
Number of extensions: 280433
Number of successful extensions: 1089
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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