Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L19
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   304   7e-85
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   304   7e-85
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.53 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.5  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  304 bits (746), Expect = 7e-85
 Identities = 141/173 (81%), Positives = 152/173 (87%)
 Frame = +1

Query: 217 VFDSLKXKXXSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 396
           VFD LK K  SF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 18  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 77

Query: 397 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKVSG 576
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNP LTE+QYKEME+KVS 
Sbjct: 78  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 137

Query: 577 TLSXLEGELKGTFYPLTGMSXETXXXXIXDXFLSKEGDRFLXAXXAXRFWPTG 735
           TLS LEGELKGTFYPLTGMS ET    I D FL KEGDRFL A  A RFWPTG
Sbjct: 138 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTG 190


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  304 bits (746), Expect = 7e-85
 Identities = 140/173 (80%), Positives = 151/173 (87%)
 Frame = +1

Query: 217 VFDSLKXKXXSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 396
           VFD LK K  SF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 34  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 93

Query: 397 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKVSG 576
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNP LTE+QYKEME+KVS 
Sbjct: 94  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 153

Query: 577 TLSXLEGELKGTFYPLTGMSXETXXXXIXDXFLSKEGDRFLXAXXAXRFWPTG 735
           TLS LEGELKGTFYPLTGMS ET    I D FL KEGDRFL A  A RFWPTG
Sbjct: 154 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTG 206


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -1

Query: 480 GDHELAGGVEVAER---VHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHGVRLGVRRV-D 313
           GD  L G + V ER   +   PV+ +  V  LEA++  LD    Q    GVR+G   + D
Sbjct: 115 GDLVLGGLMMVHERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVPGVRIGAHILDD 174

Query: 312 TDAGVQVLDTRLDTVK 265
            D     L+  +D +K
Sbjct: 175 CDNDTYGLEMSVDFIK 190


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 281 RVSRTWTPASVSTRRTPSRTP 343
           +V   W P  +  RRTP  TP
Sbjct: 352 QVFLNWMPRLLMMRRTPYSTP 372


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,582
Number of Sequences: 438
Number of extensions: 2365
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)