Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_L18
(898 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 203 4e-51
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 173 5e-42
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 141 2e-32
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 139 1e-31
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 136 9e-31
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 130 6e-29
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 128 1e-28
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 119 9e-26
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 111 3e-23
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 96 1e-18
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 89 1e-16
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 88 3e-16
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 86 1e-15
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 85 2e-15
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 84 5e-15
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 82 2e-14
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 81 3e-14
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 81 5e-14
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 80 7e-14
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 73 8e-12
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 68 3e-10
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 66 9e-10
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 60 1e-07
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 59 1e-07
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 56 1e-06
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 56 2e-06
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 53 9e-06
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 52 2e-05
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 52 3e-05
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 50 8e-05
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.021
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 39 0.15
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.46
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.80
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 1.1
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 4.3
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 5.7
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 33 7.5
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 7.5
UniRef50_Q0VTV2 Cluster: Putative arsenite efflux pump; n=1; Pse... 33 9.9
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 9.9
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 203 bits (496), Expect = 4e-51
Identities = 96/137 (70%), Positives = 114/137 (83%)
Frame = +2
Query: 113 MQFXKQVPXXXXXXXXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 292
M+F V HF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 293 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 472
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 473 RRAKGRLAALGKDKGKY 523
R+AK R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 173 bits (421), Expect = 5e-42
Identities = 85/137 (62%), Positives = 107/137 (78%)
Frame = +2
Query: 113 MQFXKQVPXXXXXXXXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 292
M+F V HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 293 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 472
HY+GQQ+GKV+QVYRKK+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILE 119
Query: 473 RRAKGRLAALGKDKGKY 523
R+ +GK+KGKY
Sbjct: 120 RK-------VGKEKGKY 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 141 bits (342), Expect = 2e-32
Identities = 62/125 (49%), Positives = 93/125 (74%)
Frame = +2
Query: 107 ASMQFXKQVPXXXXXXXXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVV 286
+ M+F KQ+ HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV +
Sbjct: 28 SKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLIC 87
Query: 287 RGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAI 466
RGH G++ GKV+++ RK+F +Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK I
Sbjct: 88 RGHNHGRE-GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKI 146
Query: 467 LDRRA 481
LDR+A
Sbjct: 147 LDRKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 139 bits (336), Expect = 1e-31
Identities = 67/115 (58%), Positives = 88/115 (76%)
Frame = +2
Query: 164 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 343
HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K
Sbjct: 19 HFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLK 77
Query: 344 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 508
+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 78 WAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 136 bits (328), Expect = 9e-31
Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +2
Query: 224 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 397
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 398 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 523
+VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 130 bits (313), Expect = 6e-29
Identities = 60/110 (54%), Positives = 86/110 (78%)
Frame = +2
Query: 164 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 343
+F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR K
Sbjct: 19 YFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLK 77
Query: 344 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 493
F V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 78 FAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 128 bits (310), Expect = 1e-28
Identities = 71/141 (50%), Positives = 95/141 (67%)
Frame = +2
Query: 101 QRASMQFXKQVPXXXXXXXXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 280
Q A + QVP P H+RR L +P ++++ + P+RKDDEVQ
Sbjct: 14 QSARDELPAQVPEGALHGAVVRPPRP-HVRRALHRAP--PQVQRPLH----PVRKDDEVQ 66
Query: 281 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 460
VVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T VGIHPSK V+ KLK++KDRK
Sbjct: 67 VVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRK 125
Query: 461 AILDRRAKGRLAALGKDKGKY 523
AILDR+A GR A K KGK+
Sbjct: 126 AILDRKASGR--AADKAKGKF 144
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 119 bits (287), Expect = 9e-26
Identities = 56/112 (50%), Positives = 83/112 (74%)
Frame = +2
Query: 173 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVV 352
APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ +
Sbjct: 21 APSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTI 79
Query: 353 YIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 508
IE++ R KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 80 QIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 111 bits (266), Expect = 3e-23
Identities = 53/108 (49%), Positives = 78/108 (72%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++GH K GKV V R K+
Sbjct: 19 YTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKY 76
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 490
V+ I+++ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 77 VINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 95.9 bits (228), Expect = 1e-18
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
F+A + +S+ L+KE + VK +PIR+DDEV + G + G++ GKV+ V +
Sbjct: 20 FNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSEN 78
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 514
+ ++ REK NG T +V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 79 RIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/104 (41%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG + G+V++V K+
Sbjct: 17 FNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRL 75
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 475
+Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 76 RIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +2
Query: 173 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVV 352
AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG + GKV +V K+ +
Sbjct: 20 APWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRI 78
Query: 353 YIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 505
Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 79 YVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 85.8 bits (203), Expect = 1e-15
Identities = 43/96 (44%), Positives = 63/96 (65%)
Frame = +2
Query: 101 QRASMQFXKQVPXXXXXXXXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQ 280
+R +M++ V HF+APS RR LMS+ LS EL+ + ++PIR +DEV+
Sbjct: 16 RRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVR 75
Query: 281 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 388
V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 76 VTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/62 (64%), Positives = 53/62 (85%)
Frame = +2
Query: 194 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQR 373
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 374 EK 379
EK
Sbjct: 105 EK 106
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 83.8 bits (198), Expect = 5e-15
Identities = 40/98 (40%), Positives = 67/98 (68%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG +KG + G+V++V K++
Sbjct: 17 FNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRY 75
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 460
+Y+E ++ +G IHPS +I+KL +KD K
Sbjct: 76 RIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 82.2 bits (194), Expect = 2e-14
Identities = 43/119 (36%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G + GKV++V RK+
Sbjct: 14 YNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRG 72
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGRLAALGKDKGK 520
V IE + ++KA+G YV +H SK +I KL +K+R ++R+ K R K K
Sbjct: 73 RVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 81.4 bits (192), Expect = 3e-14
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Frame = +2
Query: 164 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 343
+F+A + R +MSS LSKELR + +K+MPIR+ D V++ G +KG GKV++V R+
Sbjct: 18 YFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRD 75
Query: 344 FVVYIERIQREKANGATAYV--GIHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 508
+ + +E I ++ N V IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 76 YKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 80.6 bits (190), Expect = 5e-14
Identities = 43/106 (40%), Positives = 62/106 (58%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
+ AP HIR + +PLS EL+QK +K + +RK D V +VRG +KG + GKV V KK
Sbjct: 18 YDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKG 76
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 484
+++E KA+G IHPSK V+ +L ++ R+ L R K
Sbjct: 77 RIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 80.2 bits (189), Expect = 7e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +2
Query: 164 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 304
HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 18 HFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 73.3 bits (172), Expect = 8e-12
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 206 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 385
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKAD 66
Query: 386 GATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 481
G Y+ IH SK I KL N RK I++R+A
Sbjct: 67 GTPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 68.1 bits (159), Expect = 3e-10
Identities = 36/109 (33%), Positives = 61/109 (55%)
Frame = +2
Query: 164 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 343
HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G++ G + ++ +
Sbjct: 19 HFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRD 77
Query: 344 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 490
+ VYIE K +G A V I+PSK I K + RK L+R+ + R
Sbjct: 78 YKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 66.5 bits (155), Expect = 9e-10
Identities = 37/97 (38%), Positives = 63/97 (64%)
Frame = +2
Query: 170 SAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFV 349
+AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+ + K +
Sbjct: 31 NAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYR 89
Query: 350 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 460
VY+ + ++ HPSK I+KL ++ D+K
Sbjct: 90 VYLS-LDTDR------QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/99 (31%), Positives = 55/99 (55%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG + GKV V
Sbjct: 20 YTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDG 78
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 463
+ ++ + K +G I+PS +I KL+M R+A
Sbjct: 79 TIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 59.3 bits (137), Expect = 1e-07
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +2
Query: 167 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 346
+ A + R + + SPLSKELR K+ +S+ + + D V VVRG YK GKV V +
Sbjct: 12 YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESG 70
Query: 347 VVYIERIQREKANGATAYVGIHPSKCVIVKL 439
V IE I++EK G V I SK V+ L
Sbjct: 71 SVAIEGIKKEKGKGDKFDVLIRASKVVVTGL 101
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +2
Query: 212 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 391
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGK 67
Query: 392 TAYVGIHPSKCVIVKLKMNKDRK 460
GI P K I L +++ +
Sbjct: 68 QKGFGISPEKLQITHLDLSRSER 90
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 55.6 bits (128), Expect = 2e-06
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +2
Query: 200 MSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 379
+ S LSK+L++K+ +S+ + + D V ++RG +KG GKV +V K V IE +++EK
Sbjct: 23 LGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEK 81
Query: 380 ANGATAYVGIHPSKCVIVKL 439
G V IH S ++ L
Sbjct: 82 TKGDKFDVFIHTSNLLVTSL 101
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 53.2 bits (122), Expect = 9e-06
Identities = 36/123 (29%), Positives = 58/123 (47%)
Frame = -1
Query: 475 AIEDCFAVFIHLQLDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLTFV 296
A+ED AV + L+L + L V+ D+ + L + L+V + + LHH L V
Sbjct: 77 AVEDGLAVLVELELGDDHLGGVDPDVDGGPVHLLPRDALDVDHPPAAVDLHHLP-LAALV 135
Query: 295 VSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHXPYM*RSTEMPLPVXPA*GRHLLVEL 116
++L+ +V A+ G + ++ +G GH+ R E+ LP P RH V L
Sbjct: 136 APPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRREVRLPALPPGARHAWVAL 195
Query: 115 HAG 107
H G
Sbjct: 196 HGG 198
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 52.4 bits (120), Expect = 2e-05
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +2
Query: 212 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 391
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE + KA+G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGVTISKADGK 68
Query: 392 TAYVGIHPSKCVIVKLKMNKD 454
I S I KL ++++
Sbjct: 69 QVPFFIDHSNISITKLDLSRN 89
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 51.6 bits (118), Expect = 3e-05
Identities = 24/81 (29%), Positives = 51/81 (62%)
Frame = +2
Query: 197 LMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQRE 376
++ + LSKE+++ K++ ++K+ E++V RG +KG + GKV+Q+ ++ ++++ I R
Sbjct: 29 IIKTNLSKEMQKYHKKKTLILKKNYEIKVKRGDFKG-KTGKVIQIKPEQQKIFVDNIFRN 87
Query: 377 KANGATAYVGIHPSKCVIVKL 439
K +V + PS I+K+
Sbjct: 88 KFEKTNIFVPLKPSNIQIIKI 108
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 50.0 bits (114), Expect = 8e-05
Identities = 25/96 (26%), Positives = 53/96 (55%)
Frame = +2
Query: 173 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVV 352
AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+ V K V+
Sbjct: 15 APLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVINVDLDKAVI 73
Query: 353 YIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 460
++E + EK +G + S + L + +++
Sbjct: 74 HVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR 109
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.021
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 242 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 379
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 39.1 bits (87), Expect = 0.15
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 20/109 (18%)
Frame = +2
Query: 173 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY----------KGQQVGK- 319
AP H+RR M S L + +++S+ IR D V+V+RG + +G+++G+
Sbjct: 16 APVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDFGFPNSVKAEARGKRLGQS 75
Query: 320 ---------VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 439
++ V K VY++ + ++G + IHPS V+ KL
Sbjct: 76 RGRSGVKSTIVGVDTKSGFVYVDGVTMTTSDGKEEALPIHPSNLVVTKL 124
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.46
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 176 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 355
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 356 IERI 367
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.80
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 251 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 367
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -3
Query: 566 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 453
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 245 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 379
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 5.7
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +2
Query: 257 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 403
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 33.5 bits (73), Expect = 7.5
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -1
Query: 463 CFAVF-IHLQLDNHTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHLHHFANL- 308
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 307 LTFVVSTYNLNFIVFANRHG 248
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 33.5 bits (73), Expect = 7.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 358 NVYNKLFTIHLHHFANLLTFVVSTYNLNFIVF 263
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 7.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 236 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 400
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 251 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 379
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_Q0VTV2 Cluster: Putative arsenite efflux pump; n=1;
Pseudoclavibacter helvolus|Rep: Putative arsenite efflux
pump - Pseudoclavibacter helvolus
Length = 233
Score = 33.1 bits (72), Expect = 9.9
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 54 WLPFLLSGSSPVSFW--RSAPACSSTSRCLPQAGKTGSG 164
WL L + S+ SFW RSA +CSS SRC P SG
Sbjct: 108 WLG-LPTTSADFSFWPSRSACSCSSASRCSPATSPAASG 145
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 251 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 379
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,067,801
Number of Sequences: 1657284
Number of extensions: 11871994
Number of successful extensions: 31406
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 29304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31164
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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