Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L14
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    32   0.65 
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187...    30   2.6  
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988...    29   4.6  

>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +2

Query: 461 CLFCACASQSRSILVCLLHRCYPAPXI 541
           CLFC     SR ILVC L RC  AP +
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAPSL 84


>01_06_0006 -
           25517892-25517935,25518156-25518276,25518598-25518733,
           25519189-25519280,25519358-25519426,25519710-25519821,
           25519897-25520015,25520302-25520355,25520811-25520891,
           25520968-25521051,25521124-25521315,25521633-25521746,
           25521832-25521978,25522066-25522302,25522762-25522810,
           25522894-25523027,25523124-25523324,25523532-25523701,
           25523773-25523875,25524198-25524361,25525015-25525055,
           25525144-25525187
          Length = 835

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
 Frame = +3

Query: 150 TIKSKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYK-------IGKDYDIEMNMDNYTNK 308
           ++ ++ VD V+   Q+K +  ++ ++    ++  Y+       I K    E +   Y NK
Sbjct: 645 SLDNQCVDRVYRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEERDFRRYINK 704

Query: 309 KAVEEFLKMYRTGF----MPKNLEFSVFYDKMRDEAI 407
              +EFLK+   GF    + K LE     D M + A+
Sbjct: 705 LGYKEFLKLPEMGFGTSLLQKRLEIETMTDNMSELAV 741


>01_01_1224 -
           9888726-9888820,9889042-9889085,9889194-9889282,
           9889390-9889434,9889849-9889956,9890042-9890127,
           9890324-9890411,9890669-9890872,9891251-9891326,
           9891429-9891478,9891753-9891815,9891942-9891995,
           9892079-9892181,9892266-9892368,9892563-9892623,
           9892746-9892786,9893183-9893348
          Length = 491

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 640 HVASLLRKFFAAX-PIFINILGYTSYEQEQRNRGNXGRWITAM 515
           ++ASLL+  FAA   I  NIL  T+  QEQR   N G  +T M
Sbjct: 391 NIASLLKNMFAATITIACNILQNTAVTQEQRGVAN-GISVTLM 432


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,776,522
Number of Sequences: 37544
Number of extensions: 301822
Number of successful extensions: 600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)