Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L11
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    32   2.4  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             32   2.4  

>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 584  TFTCDSXGEPKVTLSSDLNSALEKDSGTNSLDPDTEPLKTLRPAAICKIAXSCYINVVHX 763
            T   D+  EPK + S +L+S   +   T+ +  DTE +      A+ K+  S  ++  H 
Sbjct: 9771 TEVLDTSSEPKTSSSPNLSSTSVEIPATSEIMTDTEKIHPSSNTAVAKVRTSSSVHESHS 9830

Query: 764  SEL 772
            S L
Sbjct: 9831 SVL 9833


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 584  TFTCDSXGEPKVTLSSDLNSALEKDSGTNSLDPDTEPLKTLRPAAICKIAXSCYINVVHX 763
            T   D+  EPK + S +L+S   +   T+ +  DTE +      A+ K+  S  ++  H 
Sbjct: 1475 TEVLDTSSEPKTSSSPNLSSTSVEIPATSEIMTDTEKIHPSSNTAVAKVRTSSSVHESHS 1534

Query: 764  SEL 772
            S L
Sbjct: 1535 SVL 1537


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,093,472
Number of Sequences: 237096
Number of extensions: 2145025
Number of successful extensions: 3754
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3754
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)