Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L05
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   0.60 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    25   0.60 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.7  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 509 ILIWEIVTDDMHRTIKKNCGII 574
           + IW I TDDMH    +  G++
Sbjct: 347 VFIWSIETDDMHEFCGEKNGLL 368


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 509 ILIWEIVTDDMHRT 550
           ++IW I TDD+H T
Sbjct: 346 VMIWSIETDDLHAT 359


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = +1

Query: 445 FGTLERNCLFQRFLRFNPKPIYIDMGNRYRRHASDDQEELRHHNEHFLIPR 597
           F    RNC+ Q+F     K +   +  ++   A D ++++   ++  L P+
Sbjct: 428 FSAGSRNCIGQKFAMLEIKTVLCGILKKFILEAVDTRKDMAFVSDLVLRPK 478


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = +1

Query: 445 FGTLERNCLFQRFLRFNPKPIYIDMGNRYRRHASDDQEELRHHNEHFLIPR 597
           F    RNC+ Q+F     K +   +  ++   A D ++++   ++  L P+
Sbjct: 428 FSAGSRNCIGQKFAMLEIKTVLCGILKKFILEAVDTRKDMAFVSDLVLRPK 478


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 567 PQFFLIVRCMSSVTISHINIYWLGVKPEEALEEAVSLEG 451
           P  FL+ R   ++  S + I WL V  +  +   VSL G
Sbjct: 529 PAPFLLKRENYTLPASAVGIAWLYVDNDCCIRYDVSLSG 567


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,593
Number of Sequences: 336
Number of extensions: 3884
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)