Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_L03
         (886 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X83467-1|CAA58470.1|  660|Homo sapiens 70kD peroxisomal integral...    31   5.6  
M81182-1|AAA60128.1|  659|Homo sapiens 70kDa peroxisomal membran...    31   5.6  
BT006644-1|AAP35290.1|  236|Homo sapiens ATP-binding cassette, s...    31   5.6  
BC068509-1|AAH68509.1|  549|Homo sapiens ABCD3 protein protein.        31   5.6  
BC009712-1|AAH09712.1|  236|Homo sapiens ABCD3 protein protein.        31   5.6  
AL138758-1|CAC15960.2|  659|Homo sapiens ATP-binding cassette, s...    31   5.6  
X58528-1|CAA41416.1|  659|Homo sapiens 70kDa peroxisomal membran...    30   9.7  

>X83467-1|CAA58470.1|  660|Homo sapiens 70kD peroxisomal integral
           membrane protein protein.
          Length = 660

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNL 178


>M81182-1|AAA60128.1|  659|Homo sapiens 70kDa peroxisomal membrane
           protein protein.
          Length = 659

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNL 178


>BT006644-1|AAP35290.1|  236|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 3 protein.
          Length = 236

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNL 178


>BC068509-1|AAH68509.1|  549|Homo sapiens ABCD3 protein protein.
          Length = 549

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNL 178


>BC009712-1|AAH09712.1|  236|Homo sapiens ABCD3 protein protein.
          Length = 236

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNL 178


>AL138758-1|CAC15960.2|  659|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 3 protein.
          Length = 659

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNL 178


>X58528-1|CAA41416.1|  659|Homo sapiens 70kDa peroxisomal membrane
           protein protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 19  ISLLGNSLRF*FVVLKICKNSKPRSYLKHEYFKIFLCFYCGNV 147
           ISL+ N L++    LK+C   +   YL  EY + F  +  GN+
Sbjct: 136 ISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKKGNL 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,410,464
Number of Sequences: 237096
Number of extensions: 1410003
Number of successful extensions: 4994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4994
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)