Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_K22
(956 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.014
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.014
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.014
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 37 0.025
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.043
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.043
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.043
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.13
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.17
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 31 0.92
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 3.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL021480-1|CAA16326.1| 133|Caenorhabditis elegans Hypothetical ... 29 3.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.7
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 3.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.7
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 6.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG GG PPPPPP GG P
Sbjct: 726 PPPPPPPGGLPPI-TGGPPPPPPPGGLPPISGGPP 759
Score = 35.1 bits (77), Expect = 0.075
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXGGEK 811
PPPP GG G PPPPPP GG P GG K
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP------GGCPPPPPPPPPGGFK 781
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPP 877
PPPP GG GG PPPPPP
Sbjct: 771 PPPPPPPGGFK----GGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG PPPPPP GG P
Sbjct: 759 PPPPPPPGGCPP------PPPPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG PPPPPP GG P
Sbjct: 713 PPPPPGLPPIT----GGPPPPPPPGGLPPITGGPP 743
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG GG PPPPPP GG P
Sbjct: 726 PPPPPPPGGLPPI-TGGPPPPPPPGGLPPISGGPP 759
Score = 35.1 bits (77), Expect = 0.075
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXGGEK 811
PPPP GG G PPPPPP GG P GG K
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP------GGCPPPPPPPPPGGFK 781
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPP 877
PPPP GG GG PPPPPP
Sbjct: 771 PPPPPPPGGFK----GGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG PPPPPP GG P
Sbjct: 759 PPPPPPPGGCPP------PPPPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG PPPPPP GG P
Sbjct: 713 PPPPPGLPPIT----GGPPPPPPPGGLPPITGGPP 743
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG GG PPPPPP GG P
Sbjct: 309 PPPPPPPGGLPPI-TGGPPPPPPPGGLPPISGGPP 342
Score = 35.1 bits (77), Expect = 0.075
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXGGEK 811
PPPP GG G PPPPPP GG P GG K
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP------GGCPPPPPPPPPGGFK 364
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPP 877
PPPP GG GG PPPPPP
Sbjct: 354 PPPPPPPGGFK----GGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG PPPPPP GG P
Sbjct: 342 PPPPPPPGGCPP------PPPPPPPGGFKGGPPPP 370
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP GG PPPPPP GG P
Sbjct: 296 PPPPPGLPPIT----GGPPPPPPPGGLPPITGGPP 326
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 36.7 bits (81), Expect = 0.025
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXG 820
PPPP GG GG PPPP GGGG P + + G
Sbjct: 782 PPPPSFRGGR-----GGHGGPPPPHFDRRGGGGPPFRPENGRG 819
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G R G PPPPPP G P
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G R G PPPP GG P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPP 880
PPPP G G PPPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPP 259
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 947 PPPXXXXGGXXXXGGGGXPPPPP 879
PPP G G G PPPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPP 259
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G R G PPPPPP G P
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G R G PPPP GG P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPP 880
PPPP G G PPPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPP 280
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 947 PPPXXXXGGXXXXGGGGXPPPPP 879
PPP G G G PPPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPP 280
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G R G PPPPPP G P
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G R G PPPP GG P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPP 880
PPPP G G PPPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPP 265
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 947 PPPXXXXGGXXXXGGGGXPPPPP 879
PPP G G G PPPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPP 265
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGG 856
PPPP G G PPPPPP GG
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGG 850
PPPP G PPPPP G GG
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPP 877
PPPP G PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPP 636
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXG-GGGXP 844
PPPP G PPPPPP G G P
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAP 649
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGG 856
PPPP G G PPPPPP GG
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGG 850
PPPP G PPPPP G GG
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPP 877
PPPP G PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPP 462
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXG-GGGXP 844
PPPP G PPPPPP G G P
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAP 475
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXGG 817
PPPP G GG PPPPPP GG P + G
Sbjct: 319 PPPPSRFGPPGM---GGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXG--GXPPPPPPXXXXXGG-GGXP 844
PPPP G G G PPPPPP G GG P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 945 PPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPP G GG PPPPPP G G P
Sbjct: 334 PPPPPPG---MRYPGGMPPPPPPRYPSAGPGMYP 364
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXGG 817
PPPP G GG PPPPPP GG P + G
Sbjct: 329 PPPPSRFGPPGM---GGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXG--GXPPPPPPXXXXXGG-GGXP 844
PPPP G G G PPPPPP G GG P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 945 PPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPP G GG PPPPPP G G P
Sbjct: 344 PPPPPPG---MRYPGGMPPPPPPRYPSAGPGMYP 374
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G PPPPPP GG P
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP 554
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.92
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 894 PPPPPPXXXXXGGGGXPXK 838
PPPPPP GGGG P +
Sbjct: 511 PPPPPPQSQQAGGGGPPTR 529
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 883 GGGGXPPPPXXXXPPXXXXGGG 948
GG G PPPP PP GGG
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGG 806
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 883 GGGGXPPPPXXXXPPXXXXGGG 948
GG G PPPP PP GGG
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGG 806
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 883 GGGGXPPPPXXXXPPXXXXGGG 948
GG G PPPP PP GGG
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGG 806
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 883 GGGGXPPPPXXXXPPXXXXGGG 948
GG G PPPP PP GGG
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGG 806
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 PPFLXNGXLXXPKK--NFSXPPPXXXGGXLXGGVFXGGPPXXFFFFXXPPPP 627
PP + NG + P PPP GG GG P F PPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKK 832
PPPP GG PPPPP G P + K
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPK 133
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 927 GGXXXXRXGGXPPPPPPXXXXXGGGGXPXKKKXXXGGEKKXXGXXXXXGXXXGG 766
GG G PPPPPP GGG GG G G GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -3
Query: 927 GGXXXXRXGGXPPPPPP--XXXXXGGGGXPXKKKXXXGGEKKXXGXXXXXGXXXGG 766
GG G PPPPPP GGGG GG G G GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 98
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 942 PPXXXGGXXXXRXGGXPPPPPPXXXXXGG 856
PP G R G PPPPPP G
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPPRSSGANG 548
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGG 853
P P G R G PPPPPP G
Sbjct: 517 PMKPPSSSGSGSNRRSGPPPPPPPPRSSGANG 548
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 903 GGXPPPPPPXXXXXGGGG 850
G PPPPPP GGGG
Sbjct: 28 GCAPPPPPPSPCGCGGGG 45
>U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical
protein C42D4.3 protein.
Length = 255
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 903 GGXPPPPPPXXXXXGGGG 850
GG PPPPPP GGG
Sbjct: 33 GGCPPPPPPMCSGGCGGG 50
>AL021480-1|CAA16326.1| 133|Caenorhabditis elegans Hypothetical
protein Y39E4A.1 protein.
Length = 133
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 903 GGXPPPPPPXXXXXGGGGXPXKK 835
GG PPPPPP GG KK
Sbjct: 42 GGTPPPPPPDAHGAAGGLVSDKK 64
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
P PP GG G PPPPP G G P
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPP--LPPVGAGAPP 248
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 903 GGXPPPPPPXXXXXGGGG 850
G PPPPPP GGGG
Sbjct: 28 GCAPPPPPPACGCGGGGG 45
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
P PP GG G PPPPP G G P
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPP--LPPVGAGAPP 234
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
P PP GG G PPPPP G G P
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPP--LPPVGAGAPP 234
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = -3
Query: 927 GGXXXXRXGGXPPPPPPXXXXXGGG---GXPXKKKXXXGGEKKXXGXXXXXGXXXGG 766
GG PPPPPP GGG P GG G G GG
Sbjct: 52 GGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGG 108
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = -3
Query: 927 GGXXXXRXGGXPPPPPPXXXXXGGG---GXPXKKKXXXGGEKKXXGXXXXXGXXXGG 766
GG PPPPPP GGG P GG G G GG
Sbjct: 52 GGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGG 108
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 5/28 (17%)
Frame = +1
Query: 880 GGGGGX-----PPPPXXXXPPXXXXGGG 948
GGGGG PPPP PP GGG
Sbjct: 24 GGGGGCGCGAPPPPPACAPPPAPACGGG 51
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = -3
Query: 939 PXXXGGXXXXRXGGXPPPP---PPXXXXXGGGGXP 844
P GG G PPPP PP GGG P
Sbjct: 20 PSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPP 54
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 948 PPPPXXXGGXXXXRXGGXPPPPPPXXXXXGGGGXP 844
PPPP G PPPPPP GG P
Sbjct: 561 PPPPPPP---LPQNLSGAPPPPPPPPPMLGGPPPP 592
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 927 GGXXXXRXGGXPPPPPPXXXXXGGGG 850
GG GG PPP P GGGG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGG 87
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = -3
Query: 894 PPPPPPXXXXXGGGGXPXKKKXXXGGEKKXXGXXXXXGXXXGG 766
PPPPPP GG ++ GG G GG
Sbjct: 307 PPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGG 349
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 7/67 (10%)
Frame = -3
Query: 945 PPPXXXGGXXXXRXGGX-------PPPPPPXXXXXGGGGXPXKKKXXXGGEKKXXGXXXX 787
PPP GG GG PPP P GGGG GG G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Query: 786 XGXXXGG 766
G GG
Sbjct: 110 CGGGGGG 116
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 927 GGXXXXRXGGXPPPPPPXXXXXGGGG 850
GG GG PPP P GGGG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGG 87
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = -3
Query: 894 PPPPPPXXXXXGGGGXPXKKKXXXGGEKKXXGXXXXXGXXXGG 766
PPPPPP GG ++ GG G GG
Sbjct: 307 PPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGG 349
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 7/67 (10%)
Frame = -3
Query: 945 PPPXXXGGXXXXRXGGX-------PPPPPPXXXXXGGGGXPXKKKXXXGGEKKXXGXXXX 787
PPP GG GG PPP P GGGG GG G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Query: 786 XGXXXGG 766
G GG
Sbjct: 110 CGGGGGG 116
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Frame = +1
Query: 493 NGXLXXPKKNFSXPP-----PXXXGGXLXGGVFXGGPPXXFFFFXXPPPPXG 633
N L ++N PP P GG + GG GG F PPPP G
Sbjct: 168 NVDLERDRRNRGLPPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYG 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,811,083
Number of Sequences: 27780
Number of extensions: 320957
Number of successful extensions: 2340
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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