Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_K16
(1011 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 32 0.84
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 25 1.9
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 30 2.6
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 30 3.4
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 30 3.4
12_01_0454 + 3580332-3581714 29 4.5
09_02_0351 - 7686974-7686983,7687142-7687195,7687363-7687408,768... 29 5.9
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 5.9
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 29 5.9
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 29 7.8
06_03_1310 + 29238644-29240260 29 7.8
05_01_0080 - 535443-535481,535569-535698,536483-536586,536686-53... 29 7.8
02_05_0686 - 30900748-30902167,30903442-30904742 24 8.3
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 25 8.6
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 955 PPPPPPPXXGXKKKKKKK 902
PPPPPP G + KKKKK
Sbjct: 39 PPPPPPQLRGGETKKKKK 56
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 954 PPPPPPPXGXXKKKKKKK 901
PPPPPP + KKKKK
Sbjct: 39 PPPPPPQLRGGETKKKKK 56
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 952 PPPPPPXXGXKKKKKKK 902
PPPPPP KK+K
Sbjct: 27 PPPPPPTSSTAAPKKRK 43
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 955 PPPPPPP 935
PPPPPPP
Sbjct: 10 PPPPPPP 16
>06_02_0257 - 13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -1
Query: 1008 PPXGGGGXF---FXXXXXXXXPPPPPPP 934
PP GGGG F PPPPPPP
Sbjct: 43 PPGGGGGDRRGGFQLPPDAAPPPPPPPP 70
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 29.9 bits (64), Expect = 3.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 955 PPPPPPPXXGXKKKKKK 905
PPPPPPP G ++ K++
Sbjct: 76 PPPPPPPEQGEERSKRR 92
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 1011 PPPXG--GGGXFFXXXXXXXXPPPPPPPXGXXKKKK 910
PPP G GGG + PPPPPP ++++
Sbjct: 16 PPPFGRGGGGAGYPRGHKQLYAPPPPPPPQHQQQRR 51
>12_01_0454 + 3580332-3581714
Length = 460
Score = 29.5 bits (63), Expect = 4.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 955 PPPPPPPXXGXKKKKKKK 902
PPPPPPP G ++ K+++
Sbjct: 371 PPPPPPPTSGRRRHKQEE 388
>09_02_0351 -
7686974-7686983,7687142-7687195,7687363-7687408,
7688179-7688280,7688683-7689284,7689599-7689783
Length = 332
Score = 29.1 bits (62), Expect = 5.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 955 PPPPPPPXXGXKKKKKK 905
PPPPPPP G +++++K
Sbjct: 71 PPPPPPPPHGQQQQQQK 87
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 1007 PPXXXGXXFFXXXXXXXXPPPPPPPXG 927
PP G + PPPPPPP G
Sbjct: 530 PPPPYGYASYYPSVTPVQPPPPPPPAG 556
>01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 929 PXGGGGGGGXXXXXXXKKXXPPPPXG 1006
P GGGGGG +K PPP G
Sbjct: 21 PAGGGGGGPGAPASPWRKTTPPPVAG 46
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 28.7 bits (61), Expect = 7.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 955 PPPPPPPXXGXKKKKKKK 902
PPPPPPP G +++ +++
Sbjct: 204 PPPPPPPARGRRRRGRRQ 221
>06_03_1310 + 29238644-29240260
Length = 538
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -1
Query: 1008 PPXGGGGXF-FXXXXXXXXPPPPPPPXG 928
PP GGGG F PPPPP G
Sbjct: 487 PPQGGGGKLPFPPVHGVAYSSPPPPPSG 514
>05_01_0080 -
535443-535481,535569-535698,536483-536586,536686-536903,
537755-537762,538146-538183,538475-538668,539168-539296,
539392-539481,539726-539839,540008-540154,540228-540293,
540876-540987
Length = 462
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 954 PPPPPPPXGXXKKKKKKK 901
PPPPPPP +K K K
Sbjct: 326 PPPPPPPPSEMRKTKPSK 343
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.8 bits (49), Expect(2) = 8.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 955 PPPPPPP 935
PPPPPPP
Sbjct: 353 PPPPPPP 359
Score = 23.0 bits (47), Expect(2) = 8.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 952 PPPPPPXXGXKK 917
PPPPPP G +
Sbjct: 377 PPPPPPKGGASR 388
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 25.4 bits (53), Expect(2) = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 955 PPPPPPPXXG 926
PPPPPPP G
Sbjct: 129 PPPPPPPFKG 138
Score = 21.4 bits (43), Expect(2) = 8.6
Identities = 8/24 (33%), Positives = 9/24 (37%)
Frame = -3
Query: 1009 PPXXXXGXXFFXXXXXXXPPPPPP 938
PP + PPPPPP
Sbjct: 112 PPPPPPHLLHYYGHPPPPPPPPPP 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,659,225
Number of Sequences: 37544
Number of extensions: 573112
Number of successful extensions: 25834
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9961
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2975543960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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