Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_K16
(1011 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 0.11
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 25 0.77
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 0.99
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 31 1.7
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 24 3.3
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 25 3.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 5.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 5.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 9.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 9.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 24 9.6
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.5 bits (58), Expect(2) = 0.11
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1011 PPPXGGGGXFFXXXXXXXXPPPPPPP 934
PPP G PPPPPPP
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPP 567
Score = 25.8 bits (54), Expect(2) = 0.11
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 954 PPPPPPPXG 928
PPPPPPP G
Sbjct: 590 PPPPPPPGG 598
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 25.4 bits (53), Expect(2) = 0.77
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 935 GGGGGGGXXXXXXXKKXXPPPPXGG 1009
GGG GGG PPP GG
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGG 63
Score = 25.0 bits (52), Expect(2) = 0.77
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 920 FXXPXGGGGGGG 955
F P GGGGGGG
Sbjct: 18 FLFPSGGGGGGG 29
Score = 24.2 bits (50), Expect(2) = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 935 GGGGGGGXXXXXXXKKXXPPPPXGG 1009
GGGG GG PPPP G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACG 62
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 914 FFFXXPXGGGGGGG 955
F F GGGGGGG
Sbjct: 18 FLFPSGGGGGGGGG 31
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.99
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPPPP--XGXXKKKK 910
GGGG + PPPPPPP G +KK+
Sbjct: 51 GGGGCGYGGGYGCGIPPPPPPPPQCGCGRKKR 82
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPPPPXG 928
GGG F PPPPPPP G
Sbjct: 217 GGGNNGFFVPVPVVIPPPPPPPPG 240
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical protein
T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 920 FXXPXGGGGGGGXXXXXXXKKXXPPPP 1000
+ P GGGGGGG PPPP
Sbjct: 77 YNRPYGGGGGGGYGRPQGYVPPPPPPP 103
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 1005 PXGGGGXFFXXXXXXXXPPPPPPP 934
P GGGG PPPPPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPP 103
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 1008 PPXGGGGXFFXXXXXXXXPPPPPP 937
P GGGG + PPPPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPP 103
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 935 GGGGGGGXXXXXXXKKXXPPPPXGG 1009
GGGGG G + PPPP GG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGG 220
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 952 PPPPPPXXGXKKK 914
PPPPPP +KK
Sbjct: 1390 PPPPPPLPSEEKK 1402
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 955 PPPPPPP 935
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 934 GGGGGGGXXXXXXXXKKXXPXXXGGG 1011
GGGGGGG P GGG
Sbjct: 240 GGGGGGGGQSNNNSSFSSVPAFNGGG 265
Score = 23.4 bits (48), Expect(2) = 3.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 928 PXGGGGGGG 954
P GGGGGGG
Sbjct: 236 PSGGGGGGG 244
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 920 FXXPXGGGGGGGXXXXXXXKKXXPPPP 1000
F P GGGGGG PPPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPP 44
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 914 FFFXXPXGGGGGGGXXXXXXXKKXXPPPPXG 1006
F F GGGGGGG PPP G
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCG 48
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 917 FFXXPXGGGGGGGXXXXXXXKKXXPPPPXGG 1009
F GGGGGGG PPPP G
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCG 48
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 3/18 (16%)
Frame = -1
Query: 954 PPPPPPP---XGXXKKKK 910
PPPPPPP G +KK+
Sbjct: 54 PPPPPPPMCGCGCGRKKR 71
Score = 22.2 bits (45), Expect(2) = 8.8
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPP 940
GGGG PPPPP
Sbjct: 26 GGGGGGCAPAAPACAPPPPP 45
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPPPPXG 928
GGGG + PPPPP P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIG 74
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPPPPXG 928
GGGG + PPPPP P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIG 74
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPPPP 934
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 999 GGGGXFFXXXXXXXXPPPPPPP 934
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPP 312
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 1010 PPPXXXGXXFFXXXXXXXXPPPPPPPXG 927
PPP PPPPPPP G
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMG 640
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 1010 PPPXXXGXXFFXXXXXXXXPPPPPPPXG 927
PPP PPPPPPP G
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMG 466
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 23.8 bits (49), Expect(2) = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 955 PPPPPPP 935
PPPPPPP
Sbjct: 87 PPPPPPP 93
Score = 22.6 bits (46), Expect(2) = 9.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 949 PPPPPXXGXKKKKK 908
PPPPP G K K
Sbjct: 98 PPPPPILGLKTPSK 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,685,091
Number of Sequences: 27780
Number of extensions: 275934
Number of successful extensions: 5572
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2245
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2657408452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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