Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_K13
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0625 - 26225201-26225879,26226706-26227553                       33   0.22 
10_01_0274 - 2901033-2901778,2902475-2902634                           30   2.8  
02_05_0989 - 33343233-33344417                                         30   2.8  
12_01_0949 - 9434951-9435131,9435555-9435682,9436493-9436666,943...    29   3.6  
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257...    29   3.6  
05_07_0206 - 28405109-28406671                                         29   6.4  
03_06_0188 + 32212297-32212746                                         29   6.4  
04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067     28   8.4  

>03_05_0625 - 26225201-26225879,26226706-26227553
          Length = 508

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
 Frame = +3

Query: 255 PDTERP--YAVNQYGLYNRNDIPPQSRPEPELGQN-----FAVYDPDTRQR----TSTAI 401
           PDT RP    VN    +    +PP+ RP P +G +     F  YDP    R    + T  
Sbjct: 126 PDTHRPAIVVVNPATRWCSPPLPPR-RP-PRMGASTFPADFLAYDPAASSRYEVLSVTCF 183

Query: 402 NRNCTAPGCCVP 437
            R C+A  CC+P
Sbjct: 184 RRRCSACSCCLP 195


>10_01_0274 - 2901033-2901778,2902475-2902634
          Length = 301

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = +3

Query: 225 PPTNWPREVAPDTERPYAVNQYGLYNRNDIPPQSRPEPELGQNFAVYDPDT 377
           PP+  P    P  E P A   YG     + PP   P PE GQ    Y P T
Sbjct: 191 PPSTPPGYGQPAPECPPADPGYG-QPAPECPPPPTPAPECGQPAPEYPPST 240


>02_05_0989 - 33343233-33344417
          Length = 394

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query: 372 PDHTQRSFALILVPVLI-GVVYRFYYTTHIDLQRMVAPYLAPLHEAS*SAANPWNICYSN 196
           P  +  S AL+L+P+L+ G +Y F Y    +LQ ++     P   A    A P  +    
Sbjct: 78  PKLSASSKALVLLPLLLLGFIYLFVYPKEFELQALMMSSCGPTTAAGAYTAAPRRLAGEP 137

Query: 195 P 193
           P
Sbjct: 138 P 138


>12_01_0949 -
           9434951-9435131,9435555-9435682,9436493-9436666,
           9436978-9437193,9437376-9437522
          Length = 281

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -2

Query: 346 PNSGSGLDWGGISFLLYNPY*FTAYGRSVSGATSRGQLVGGKSLEYMLFQSAYL 185
           P++  GL+W  +++ +Y+P  F     S+   TS+ ++VG   L       +YL
Sbjct: 11  PSACLGLNWTWLAWPIYSPIRFLTICSSIYLITSKIEIVGPYPLHTQALPQSYL 64


>08_02_1277 +
           25823835-25825113,25825201-25825418,25825501-25825724,
           25826468-25827080,25827735-25827775,25830549-25831191,
           25832595-25834012,25834110-25834251,25834415-25834522,
           25835346-25835558,25835643-25835753,25836099-25836293,
           25836555-25836695,25836835-25836909
          Length = 1806

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 225 PPTNWPREVAPDTERPYAVNQYGLYNRNDIPPQSRPEPELGQNFAVYD 368
           PP + P    P  + P   + Y  Y+R   P  S  EP     +A YD
Sbjct: 152 PPYDRPNYPPPSPQEPVRNSYYMSYDRPSYPAASPQEPTRTSYYASYD 199


>05_07_0206 - 28405109-28406671
          Length = 520

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 324 SRPEPELGQNFAVYDPDTRQRTSTAINRNCT 416
           +RP P    +FA Y PD  ++ S A   NCT
Sbjct: 103 TRPRPVYLVDFACYKPDDERKCSRARFMNCT 133


>03_06_0188 + 32212297-32212746
          Length = 149

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -2

Query: 730 PXIXGSPSXP-LQPXXXGIPGXTXGXXGDPGIPXXPANPFAPV 605
           P I G P  P + P    IPG        PGIP  P  P  PV
Sbjct: 46  PAIPGVPGVPAVGPGIPVIPGVPGVPVVGPGIPFVPVIPGVPV 88


>04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067
          Length = 1064

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 73  GARARDSGAARLVPWWSTYC 132
           GA A  +G + L+PWWS  C
Sbjct: 604 GAGAYGNGPSSLLPWWSASC 623


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,878,730
Number of Sequences: 37544
Number of extensions: 395166
Number of successful extensions: 943
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)