Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_K08
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    31   0.035
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.75 
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       26   1.3  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   7.0  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 31.5 bits (68), Expect = 0.035
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = +2

Query: 557 PPDEHHKNRRSSQ---RW---RNPTGL*RYQAFPPGXLPRALSCSDPXRLPDTCPPFSLR 718
           PP   +  RRS +   RW   R+P    R ++  P   PR+   S P RLP    PF   
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRRPFFFS 310

Query: 719 EAWRFLI 739
             W  ++
Sbjct: 311 SWWCIIL 317


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 27.1 bits (57), Expect = 0.75
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 487 SHVLSCVIXLILWITVLPPLSELIPLAA 404
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 125 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 217
           ++D  GQ T R +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 669 QESARGSXPGGNAWYLYSP 613
           +E AR S  G NAW +Y P
Sbjct: 595 EEHARISGDGYNAWAVYQP 613


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 205 SNSITNFTNKAFFSLHS 155
           SN+I NFT KAF  L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,525
Number of Sequences: 2352
Number of extensions: 13540
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)