Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_K03
(841 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 36 0.009
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 35 0.017
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 33 0.067
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 31 0.20
SPAC22H12.01c |mug35|SPAC23G3.13c|sequence orphan|Schizosaccharo... 29 0.82
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 28 1.9
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 28 1.9
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 27 2.5
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 27 3.3
SPCC1322.04 |||UTP-glucose-1-phosphate uridylyltransferase |Schi... 26 5.8
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 26 7.6
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 26 7.6
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 35.5 bits (78), Expect = 0.009
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 666 LVXFCVFLKLPETPSYLIKCGKNEXXRKVIXWLRSLPKDHXLVMR 800
++ F L LPE+P YL G+NE K++ LP DH ++ +
Sbjct: 192 ILMFFGMLFLPESPRYLAVKGRNEECMKILTRNAGLPADHPIMQK 236
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 34.7 bits (76), Expect = 0.017
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 693 LPETPSYLIKCGKNEXXRKVIXWLRSLPKDHXLV 794
LPE+P YLI GK++ K++ + LP +H ++
Sbjct: 169 LPESPRYLIAIGKDDEALKIMCYNNDLPLEHEII 202
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 32.7 bits (71), Expect = 0.067
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 666 LVXFCVFLKLPETPSYLIKCGKNEXXRKVIXWLRSLPKDHXLV 794
++ F LPE+P YLI GK+E ++ LP++H ++
Sbjct: 190 IIMFIGISFLPESPRYLIAIGKDEEALDIMCKNNVLPREHEII 232
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 666 LVXFCVFLKLPETPSYLIKCGKNEXXRKVIXWLRSLPKDHXLV 794
++ F LPE+P YLI G++E +++ LP +H ++
Sbjct: 190 IITFIGISFLPESPRYLISVGRDEEALQIMAKNNDLPIEHEVI 232
>SPAC22H12.01c |mug35|SPAC23G3.13c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 29.1 bits (62), Expect = 0.82
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 375 WYRHGLDLPSQSASHGRRHTIERPRSRRRKY 467
W R+ LD PS R+ ++ P+ R +KY
Sbjct: 151 WDRYDLDQPSNQDVEESRNLVQEPKHRSKKY 181
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 687 LKLPETPSYLIKCGKNEXXRKVI 755
L LPE+P YLI+ GK+E +V+
Sbjct: 201 LFLPESPRYLIQVGKDEEAVRVL 223
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -2
Query: 210 IINKREIHKKARVIFFYKSAKVKKKVSNFEIVNRSKYETALPASTRVM 67
++N IH + R+ +K K + F+I+N KY + +V+
Sbjct: 432 VLNNYGIHNEERLSIVFKPLGASPKDTFFDIINNQKYVVNTDGTLKVV 479
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 488 FIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLVFILGDFLPFNT 637
F+F +A F++ D+ GR+ LLC S + AG L I FLP +T
Sbjct: 379 FVFTIVA-FMF---IDRIGRRRILLCTSA-VMIAGLALCAIAYHFLPADT 423
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +2
Query: 485 MFIFAPIAVFIY-GIAADKFGRKNALLCCSIPIATAGNLLVFILG---DFLPFNTVLWIL 652
+F+F+ I G +FGR LL S+P+ G L + + G + VL ++
Sbjct: 394 VFVFSMTTTAILSGFLMKRFGRFKMLLMISVPMYVLGILGIILFGINDNHYTRPLVLVLI 453
Query: 653 LAIPAGALLCI 685
LA G LL +
Sbjct: 454 LAGMGGGLLTL 464
>SPCC1322.04 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 234 NTDDITAQIINKREIHK 184
NTD+ TA++I K E HK
Sbjct: 168 NTDEATAKVIKKYEAHK 184
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 482 IMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLVFILGDFLPFNTVLWILLA 658
I ++ + +G +D+FGRKN ++ +I + + L G N +L L+A
Sbjct: 123 IAYVGTIVGQLSFGWYSDRFGRKNGMITATIILIVSTALCTGAYGYKGSINGMLSALIA 181
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 693 LPETPSYLIKCGKNEXXRKVIXWLRSLPKDHXLV 794
L E+P YL+ GK++ +V+ LP D ++
Sbjct: 199 LSESPRYLVSIGKDDEAIQVMCKNAELPPDSDII 232
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,195,293
Number of Sequences: 5004
Number of extensions: 65179
Number of successful extensions: 153
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -