Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_K03
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 30 1.8
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 30 1.8
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 30 1.8
U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical p... 29 4.1
U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical pr... 29 4.1
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 29 4.1
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 29 5.4
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 28 7.2
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 28 9.5
U41532-2|AAV28353.1| 292|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 28 9.5
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 467 SWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLVFILG---DFLPFNT 637
+W+A+I FI A + +YG D FGRK P++ G + I G F P
Sbjct: 97 AWIATIQFIGALVGALVYGHLGDHFGRK--------PVSFVGISIGIIFGVASGFAPSWE 148
Query: 638 VLWILLAIPAGALLCI 685
V +LL I ++ CI
Sbjct: 149 VFAVLLFICGTSVACI 164
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 479 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLV 604
++ FI I F G+ ADK GRK L C + LL+
Sbjct: 151 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 192
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 479 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLV 604
++ FI I F G+ ADK GRK L C + LL+
Sbjct: 117 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 158
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 467 SWMASIMFIFAPIAVFIYGIAADKFGRK 550
+W+A+I FI I YG D FGRK
Sbjct: 97 AWVATIQFIGVLIGAITYGHLGDHFGRK 124
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 479 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLV 604
++ FI I F G+ ADK GRK L C + LL+
Sbjct: 151 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 192
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 479 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIATAGNLLV 604
++ FI I F G+ ADK GRK L C + LL+
Sbjct: 117 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 158
>U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical
protein C32B5.15 protein.
Length = 296
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 210 IINKREIHKKARVIFFYKSAKVKKKVSNF 124
I+N + H K+ +IFF+K ++K+ +F
Sbjct: 146 ILNLHQTHLKSNIIFFWKQGMSQQKIHHF 174
>U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical
protein C23H3.5 protein.
Length = 403
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/62 (17%), Positives = 33/62 (53%)
Frame = -2
Query: 225 DITAQIINKREIHKKARVIFFYKSAKVKKKVSNFEIVNRSKYETALPASTRVMARGVRAM 46
++ AQ++ +++K A + K K++++ E+V + ++E+ + R+ + A+
Sbjct: 187 EVVAQVLEMEKVYKIAAGVMMTADLKFPKELNDLEVVRKIRHESRIFDERRMETSNLTAI 246
Query: 45 XK 40
+
Sbjct: 247 SR 248
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 521 GIAADKFGRKNALLCCSIPIATAGNLLVFILGDFLPFNTVLWILLAIPAGALLC 682
GIA+DK GRK P +L +LG FLPFN + L I + +C
Sbjct: 146 GIASDKIGRK--------PTIIGFGILSSMLGVFLPFNDYYPMFLLIRLLSAIC 191
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 521 GIAADKFGRKNALLCCSIPIATAGNLLVFILGDFLPFNTVLWILLAIPAGALLC 682
GIA+DK GRK P +L +LG FLPFN + L I + +C
Sbjct: 292 GIASDKIGRK--------PTIIGFGILSSMLGVFLPFNDYYPMFLLIRLLSAIC 337
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 258 LKEKYLKKNTDDITAQIINKREIHKK 181
L +KYL+ N DDI + I+ K + KK
Sbjct: 848 LLKKYLRNNMDDIISSILRKEKKQKK 873
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 705 VFPAASGIHRXAPAGMASSIHSTVLNGRKSPKMNT-RRFPAVAIGIEQQR 559
VF S +H P G+ IH + ++ K KM P + IGI R
Sbjct: 719 VFEKESPLHVLKPTGLDIQIHKSSIDDLKLAKMRVIGDLPNIVIGISDDR 768
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 705 VFPAASGIHRXAPAGMASSIHSTVLNGRKSPKMNT-RRFPAVAIGIEQQR 559
VF S +H P G+ IH + ++ K KM P + IGI R
Sbjct: 719 VFEKESPLHVLKPTGLDIQIHKSSIDDLKLAKMRVIGDLPNIVIGISDDR 768
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 669 VXFCVFLKLPETPSYLIKCGKNEXXRKVIXWLRSLPK 779
+ C FL LPE+P YLI+ K + K I ++ +
Sbjct: 240 ILICAFL-LPESPKYLIQARKGKLAVKSIKYINKFKR 275
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 503 IAVFIYGIAADKFGRKNALLCCSIPIATAGNLLVFILGDFLP--FNTVLW-ILLAIPAGA 673
+ I+G +D FGR+ AL+ I+ GN + ++ + P F +LW + I AG
Sbjct: 138 VGAAIFGQVSDNFGRRKALI-----ISCIGNAIFNLISSYSPSLFYFMLWRTVSGIFAGG 192
Query: 674 LLCI 685
L +
Sbjct: 193 LTVV 196
>U41532-2|AAV28353.1| 292|Caenorhabditis elegans Hypothetical
protein F11D5.7 protein.
Length = 292
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 660 SPLVXFCVFLKLPETPSYLIKCGK 731
S + FC+ L LPE+P +LI+ K
Sbjct: 115 SATIIFCLMLHLPESPKWLIQQDK 138
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 503 IAVFIYGIAADKFGRKNALLCCSIPIATAGNLLVFILGDFLP--FNTVLW-ILLAIPAGA 673
+ I+G +D FGR+ AL+ I+ GN + ++ + P F +LW + I AG
Sbjct: 138 VGAAIFGQVSDNFGRRKALI-----ISCIGNAIFNLISSYSPSLFYFMLWRTVSGIFAGG 192
Query: 674 LLCI 685
L +
Sbjct: 193 LTVV 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,769,763
Number of Sequences: 27780
Number of extensions: 368695
Number of successful extensions: 1008
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -